prot_M-pyrifera_M_contig81556.19086.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81556.19086.1
Unique Nameprot_M-pyrifera_M_contig81556.19086.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig81556.19086.1 vs. uniprot
Match: A0A0H4XER5_9DELT (Uncharacterized protein n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4XER5_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 2.670e-9
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 0 
Query:    3 GYRDADGVVVIPPIYKFASKEFNEGLAYVVAKDRRGYIHPDGSWAFDAKFTYCDKFVNGRARV 65
            G+ D  G  VIP IY      F +G+A V    R GY+HPDGSWA + +FT    F +GRA V
Sbjct:  236 GFIDRSGQQVIPAIYDAVMGGFFQGVAPVKQGTRFGYLHPDGSWALEPRFTMAQPFADGRAAV 298
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81556.19086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0H4XER5_9DELT2.670e-946.03Uncharacterized protein n=1 Tax=Myxococcus hansupu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032774WG containing repeatPFAMPF14903WG_beta_repcoord: 6..31
e-value: 1.8E-5
score: 24.9
coord: 38..67
e-value: 4.6E-4
score: 20.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81556contigM-pyrifera_M_contig81556:348..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81556.19086.1mRNA_M-pyrifera_M_contig81556.19086.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81556 348..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81556.19086.1 ID=prot_M-pyrifera_M_contig81556.19086.1|Name=mRNA_M-pyrifera_M_contig81556.19086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
MQGYRDADGVVVIPPIYKFASKEFNEGLAYVVAKDRRGYIHPDGSWAFDA
KFTYCDKFVNGRARVRQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032774WG_beta_rep