prot_M-pyrifera_M_contig815.19069.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig815.19069.1
Unique Nameprot_M-pyrifera_M_contig815.19069.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length85
Homology
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BLAST of mRNA_M-pyrifera_M_contig815.19069.1 vs. uniprot
Match: A0A6H5K1U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 6.320e-32
Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0 
Query:    1 MSTCLLLGQLFFGHWPLWLAIGPGYLLWVALDDTLKRSRNASAKQRDQFRGQWADACRGDSDAVWRKRAAARSKARNISGD 81
            +STCL+L QL F  WP WLA GP YL WVALDD+L+RSR  SAKQRD +RGQWAD CRGD D VWRKR AAR +AR + GD
Sbjct:  202 LSTCLVLEQLIFRSWPAWLAAGPAYLAWVALDDSLRRSRGKSAKQRDVWRGQWADVCRGDGDPVWRKRVAARLRARKLRGD 282
[Close]
BLAST of mRNA_M-pyrifera_M_contig815.19069.1 vs. uniprot
Match: A0A6H5JLK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK5_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.500e-32
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 0 
Query:    1 MSTCLLLGQLFFGHWPLWLAIGPGYLLWVALDDTLKRSRNASAKQRDQFRGQWADACRGDSDAVWRKRAAARSKARNI 78
            +S CL+LGQL F  WP+WLA GP YL+WV LDDTL+RSRN SAKQRDQ+R QWAD CRGD DA+WRKRAAAR  AR +
Sbjct:  387 LSMCLVLGQLIFNSWPIWLATGPAYLVWVGLDDTLRRSRNRSAKQRDQWREQWADVCRGDGDAIWRKRAAARVMARRL 464
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig815.19069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1U7_9PHAE6.320e-3269.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLK5_9PHAE8.500e-3271.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig815contigM-pyrifera_M_contig815:1292..1997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig815.19069.1mRNA_M-pyrifera_M_contig815.19069.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig815 719..2050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig815.19069.1 ID=prot_M-pyrifera_M_contig815.19069.1|Name=mRNA_M-pyrifera_M_contig815.19069.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
MSTCLLLGQLFFGHWPLWLAIGPGYLLWVALDDTLKRSRNASAKQRDQFR
GQWADACRGDSDAVWRKRAAARSKARNISGDEIR*
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