prot_M-pyrifera_M_contig81480.19062.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81480.19062.1
Unique Nameprot_M-pyrifera_M_contig81480.19062.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length189
Homology
BLAST of mRNA_M-pyrifera_M_contig81480.19062.1 vs. uniprot
Match: W4FXP0_9STRA (Importin N-terminal domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXP0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.480e-9
Identity = 54/158 (34.18%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   29 EVLVAVSHRLLTVRMTDMQQSLTTVVARIMLMEPV-TAAQRLASVPSCHNGQQSLLEAVLQRWCVQQSEFYGKYCIAATMCSFCRMLESNHPPLLQVVVPGD----RTGSSRYSLRSSR------RQQHKVPLQTKLVKLLLNHHCQLQEAGAVADPD 175
            ++L AVS RL + +M  + QSL TV AR++    V T    L S+  C          VL  W   Q +FYG Y I  T+ +  ++LES HP +L +VV G+     T S++ +LRS+       RQ  +V   TKLV +L   + Q ++     D D
Sbjct:  748 QLLHAVSTRLASAQMPSLIQSLCTVYARLVHSFGVATIVDALESLGVC--------SFVLTTWIEHQGDFYGLYAIKVTLLALLKLLESQHPVVLALVVQGEMVQNHTSSTKRALRSANKAEPTSRQYTQVSFATKLVSILAMTYAQFEDEAEADDMD 897          
BLAST of mRNA_M-pyrifera_M_contig81480.19062.1 vs. uniprot
Match: A0A3R6ZVT4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZVT4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.200e-6
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   29 EVLVAVSHRLLTVRMTDMQQSLTTVVARIMLMEPVTAAQRLASVPSCHNGQQSL--LEAVLQRWCVQQSEFYGKYCIAATMCSFCRMLESNHPPLLQVVVPGDR---TGSSRYSLRSSRRQQH----------KVPLQTKLVKLLLNHHCQLQEAGAVAD 173
            ++L AVS RL   +M  + QSL TV AR++             V S  +  +SL  L  V+  W   Q +FYG Y +  T+ +  ++LES  P +L +VV G++   TGS+R SLRSS + Q           +V   TKLV LL   + Q ++     D
Sbjct:  277 QLLHAVSTRLGNAQMPSLIQSLCTVFARLV---------HSFGVKSILDALESLGVLSFVVTTWIEHQDDFYGLYSMKVTLLALLKLLESQDPRVLSLVVKGEQLIETGSTR-SLRSSTKAQSGSRSQQIQYSQVSFATKLVGLLAMTYVQFEDEAEADD 426          
BLAST of mRNA_M-pyrifera_M_contig81480.19062.1 vs. uniprot
Match: A0A024U6P7_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6P7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.950e-6
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   29 EVLVAVSHRLLTVRMTDMQQSLTTVVARIMLMEPVTAAQRLASVPSCHNGQQSL--LEAVLQRWCVQQSEFYGKYCIAATMCSFCRMLESNHPPLLQVVVPGDR---TGSSRYSLRSSRRQQH----------KVPLQTKLVKLLLNHHCQLQEAGAVAD 173
            ++L AVS RL   +M  + QSL TV AR++             V S  +  +SL  L  V+  W   Q +FYG Y +  T+ +  ++LES  P +L +VV G++   TGS+R SLRSS + Q           +V   TKLV LL   + Q ++     D
Sbjct:  747 QLLHAVSTRLGNAQMPSLIQSLCTVFARLV---------HSFGVKSILDALESLGVLSFVVTTWIEHQDDFYGLYSMKVTLLALLKLLESQDPRVLSLVVKGEQLIETGSTR-SLRSSTKAQSGSRSQQIQYSQVSFATKLVGLLAMTYVQFEDEAEADD 896          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81480.19062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
W4FXP0_9STRA2.480e-934.18Importin N-terminal domain-containing protein n=12... [more]
A0A3R6ZVT4_9STRA4.200e-633.75Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024U6P7_9STRA4.950e-633.75Importin N-terminal domain-containing protein n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 16..180
NoneNo IPR availablePANTHERPTHR10997:SF9IMPORTIN-9coord: 16..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..189
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81480contigM-pyrifera_M_contig81480:34..624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81480.19062.1mRNA_M-pyrifera_M_contig81480.19062.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81480 34..624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81480.19062.1 ID=prot_M-pyrifera_M_contig81480.19062.1|Name=mRNA_M-pyrifera_M_contig81480.19062.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
SSSSSTRXXXXLCGAIARFSSILAALLLEVLVAVSHRLLTVRMTDMQQSL
TTVVARIMLMEPVTAAQRLASVPSCHNGQQSLLEAVLQRWCVQQSEFYGK
YCIAATMCSFCRMLESNHPPLLQVVVPGDRTGSSRYSLRSSRRQQHKVPL
QTKLVKLLLNHHCQLQEAGAVADPDGLDGDDGDFFDISD
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