prot_M-pyrifera_M_contig81479.19060.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81479.19060.1
Unique Nameprot_M-pyrifera_M_contig81479.19060.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81479.19060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001012UBX domainPFAMPF00789UBXcoord: 96..171
e-value: 3.5E-6
score: 27.1
IPR001012UBX domainPROSITEPS50033UBXcoord: 96..173
score: 13.036
NoneNo IPR availableGENE3D3.10.20.90coord: 92..175
e-value: 1.1E-15
score: 59.3
NoneNo IPR availablePANTHERPTHR23322FAS-ASSOCIATED PROTEINcoord: 6..171
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 96..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81479contigM-pyrifera_M_contig81479:349..882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81479.19060.1mRNA_M-pyrifera_M_contig81479.19060.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81479 349..882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81479.19060.1 ID=prot_M-pyrifera_M_contig81479.19060.1|Name=mRNA_M-pyrifera_M_contig81479.19060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
MAQAKKEQEERELMKREKQYQPKSGHFARAEKRPKKSERGAKESEGEGEQ
RELDPEEAEVMESNVKVSKKGLRKRAVKERKDRIPPEPPVPTAEEEQERV
TKIVVRLVVGKPIARRFLTDVTLATVKDWVEAEDPSLIDRDFVFRTTYPH
KVHDNLALTIAEASLQGTLLLVSLTDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf