prot_M-pyrifera_M_contig81446.19054.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81446.19054.1
Unique Nameprot_M-pyrifera_M_contig81446.19054.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A2D4CGN1_PYTIN (DNA-directed DNA polymerase (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGN1_PYTIN)

HSP 1 Score: 101 bits (252), Expect = 5.510e-23
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIKV+  R F FALLYFTGSDH NRSMR FAR+ G+SL+D  L  +V  R+G++ +      G ++ C SE D+  ALGME++ P ERN F+
Sbjct:  756 PHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLFARKKGWSLSDRALKRVVRVRKGTKVEA-----GEAVVCESEVDVLIALGMEYKDPTERNCFE 847          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A8K1C261_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C261_PYTOL)

HSP 1 Score: 99.8 bits (247), Expect = 2.610e-22
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIKV+  R F FALLYFTGSDH NRSMR +AR+ G+SL+D  L  +V  R+  + +      G S+ C SE D++ ALG+E++ P ERN FD
Sbjct: 1037 PHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLYARKKGWSLSDRALKRVVRVRKDVKIES-----GESVVCQSEVDVFIALGLEYKDPTERNCFD 1128          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A3R7G9Z4_9STRA (DNA polymerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G9Z4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.880e-22
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RRIDIKV+  R F FA L+FTGSDH NRSMR+FA + G++L+D  L+ ++ R  G +  Q     G S+ C SE DI+ ALG+E++ P ERN FD
Sbjct:   44 PYRRIDIKVYPRRFFSFATLHFTGSDHFNRSMRFFANKNGWNLSDRALTRVM-RVNGLKVKQ-----GESVICESEVDIFIALGLEYKEPTERNCFD 134          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A7S4CPW7_9EUGL (DNA polymerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CPW7_9EUGL)

HSP 1 Score: 90.9 bits (224), Expect = 2.740e-21
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    5 RRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERN 96
            RRIDIKV+    FPFA+LYFTGSD+ NRSMR +  + G SL+D GL  +V      R  +D   EG  IPC SE+DI+ A+G+E++ P ER+
Sbjct:   57 RRIDIKVYPKHMFPFAVLYFTGSDYFNRSMRLYCHQKGLSLSDKGLVPVV------RVKKDVVHEGPPIPCNSEKDIFDAIGLEYKEPSERS 142          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: F0WG97_9STRA (DNA polymerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG97_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.420e-20
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIKV+  R +PFALLYFTGSDH NRSMR +A++ GYSL+D  L  ++ R  G + D  D      + C +E +I+ ALG+E++ P ERN FD
Sbjct:  513 PHRRLDIKVYPRRFYPFALLYFTGSDHFNRSMRLYAKKRGYSLSDRFLKPVM-RASGHQIDIGD-----FVKCTNEAEIFIALGLEYKDPLERNCFD 603          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A5D6XPH7_9STRA (DNA polymerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPH7_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.960e-20
Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMI--VHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIKV+  R F FALLYFTGSDH NRS+R FA + G+SL+D  L  +  V+ +R +R        G S+ C SE D++ ALGM+++ P ERN FD
Sbjct:  532 PHRRLDIKVYPRRCFGFALLYFTGSDHFNRSVRLFANKKGWSLSDRALKPVTCVNDKRVAR--------GASVVCTSEVDVFIALGMDYKDPRERNCFD 622          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A662XNQ9_9STRA (BRCT domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNQ9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.020e-20
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIKV+  R F FA+LYFTGSDH NRSMR FA + G+SL+D  L  ++ R  G +  Q     G S+ C SE D++ ALG+E++ P ERN FD
Sbjct:  903 PYRRLDIKVYPRRFFGFAMLYFTGSDHFNRSMRLFAHKNGWSLSDRALQRVM-RVSGMKVQQ-----GESVICESEVDVFIALGLEYKDPTERNCFD 993          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: M4B6V3_HYAAE (DNA polymerase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6V3_HYAAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.730e-20
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0
Query:    1 ESPARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            + P RR+D+KV+    F FA+LYFTGSDH NRSMR FA + G+SL+D  L+ +V R  G+         G S+ C SE D++ ALG+E++ P ERN FD
Sbjct:  488 DRPYRRLDVKVYPRHFFGFAILYFTGSDHFNRSMRLFAHKNGWSLSDRALTQVV-RANGTTV-----RLGDSVICESEVDVFIALGLEYKDPIERNCFD 580          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A833W654_PHYIN (DNA-directed DNA polymerase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W654_PHYIN)

HSP 1 Score: 91.3 bits (225), Expect = 2.380e-19
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RR+DIK++    F FA+LYFTGSDH NRSMR FA + G+SL+D  L+ ++ R  G++        G S+ C SE D++ ALG+E++ P ERN FD
Sbjct:  591 PYRRLDIKIYPRHFFGFAMLYFTGSDHFNRSMRLFANKNGWSLSDRALTRVM-RVNGTKV-----RLGDSVICESEVDVFIALGLEYKHPTERNCFD 681          
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Match: A0A421FWQ7_9STRA (DNA polymerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FWQ7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.210e-19
Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    3 PARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGLSMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD 99
            P RRIDIKV+  R F FA L+FTGSDH NRSMR FA + G++L+D  L+ ++ R  G +  Q     G S+ C SE D++ ALG+E++ P ERN FD
Sbjct:  513 PYRRIDIKVYPRRFFGFATLHFTGSDHFNRSMRLFANKNGWNLSDRALTRVM-RINGLKVKQ-----GESVICESEVDVFIALGLEYKEPTERNCFD 603          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81446.19054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4CGN1_PYTIN5.510e-2352.58DNA-directed DNA polymerase (Fragment) n=2 Tax=Pyt... [more]
A0A8K1C261_PYTOL2.610e-2251.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7G9Z4_9STRA4.880e-2251.55DNA polymerase n=2 Tax=Phytophthora kernoviae TaxI... [more]
A0A7S4CPW7_9EUGL2.740e-2151.09DNA polymerase n=1 Tax=Eutreptiella gymnastica Tax... [more]
F0WG97_9STRA1.420e-2050.52DNA polymerase n=1 Tax=Albugo laibachii Nc14 TaxID... [more]
A0A5D6XPH7_9STRA1.960e-2050.51DNA polymerase n=1 Tax=Pythium brassicum TaxID=148... [more]
A0A662XNQ9_9STRA2.020e-2051.55BRCT domain-containing protein n=2 Tax=Nothophytop... [more]
M4B6V3_HYAAE6.730e-2048.48DNA polymerase n=1 Tax=Hyaloperonospora arabidopsi... [more]
A0A833W654_PHYIN2.380e-1948.45DNA-directed DNA polymerase n=1 Tax=Phytophthora i... [more]
A0A421FWQ7_9STRA3.210e-1950.52DNA polymerase n=2 Tax=Phytophthora kernoviae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 78..95
score: 36.67
coord: 20..27
score: 67.5
coord: 5..13
score: 48.89
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10coord: 15..95
e-value: 1.2E-20
score: 74.9
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 20..96
e-value: 2.9E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR11276:SF1DNA POLYMERASE BETAcoord: 3..94
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 3..94
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 3..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81446contigM-pyrifera_M_contig81446:138..434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81446.19054.1mRNA_M-pyrifera_M_contig81446.19054.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81446 138..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81446.19054.1 ID=prot_M-pyrifera_M_contig81446.19054.1|Name=mRNA_M-pyrifera_M_contig81446.19054.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
ESPARRIDIKVWDARAFPFALLYFTGSDHSNRSMRYFARRLGYSLTDTGL
SMIVHRRRGSRKDQDDKTEGFSIPCASEQDIYHALGMEHRFPFERNGFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR037160DNA_Pol_thumb_sf
IPR029398PolB_thumb