prot_M-pyrifera_M_contig81445.19053.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81445.19053.1
Unique Nameprot_M-pyrifera_M_contig81445.19053.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length306
Homology
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7X5WTS4_9ACTN (AAA family ATPase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTS4_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 2.200e-73
Identity = 157/289 (54.33%), Postives = 169/289 (58.48%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDS-GGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAATQTGXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETALPVLEADETESLEKGRRLAAARADIE 288
            ALTLALDEARA+AGAARLAD++GVLGTLLDLVAVD GWE AFEAA G+ALGAV+VRDP TAR +LD L  G+  GAVLALG    R    G D +R RVRGT  GVD LLDALLGHV  VDGDWR A D V+ADP RTVVTRAGDRFGPDGWRIGASGTGATGAAL EA  R AA +                                                                                   E +LP LEADETESLEKGRRLAAARA+IE
Sbjct:  485 ALTLALDEARARAGAARLADLEGVLGTLLDLVAVDPGWEAAFEAAAGDALGAVVVRDPSTARTALDLLGAGEVAGAVLALGARPSRPRPVGADLVRRRVRGTAEGVDALLDALLGHVETVDGDWRVAMDLVMADPGRTVVTRAGDRFGPDGWRIGASGTGATGAALREATARAAAAERAWHAAAGAVASARDSRARAESRAADVGERLDRVDSGLAAAGDALQRIESDRRNLTTEADALQTRFDELTVRVAREEERVAELEGSLPDLEADETESLEKGRRLAAARAEIE 773          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7W0KR38_9ACTN (AAA family ATPase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KR38_9ACTN)

HSP 1 Score: 193 bits (490), Expect = 7.560e-53
Identity = 110/176 (62.50%), Postives = 127/176 (72.16%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDS--GGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAA 174
            AL LALDEARA+AGA RLA VDGV+GTLLD+V VD GWE AFEAAVGEA+ AV+V   D  RR+L  L  GDA GAVLALG G   + S   GD++R+ VRG + GVD LLD ++G    VD DW+AA D  LA P+  VVTR GDRFGP GW +GASG+GATGAAL EA  R  A
Sbjct:   22 ALALALDEARARAGAERLAAVDGVVGTLLDVVEVDPGWEPAFEAAVGEAIAAVVVDSVDNGRRALAELRSGDAAGAVLALGAGRHPAPSMVDGDAVRSHVRGIRPGVDGLLDVIVGGCVAVD-DWKAAVDVALAHPAAVVVTRDGDRFGPTGWHVGASGSGATGAALVEARSRAGA 196          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A2D6U7B7_9ACTN (Chromosome partition protein Smc n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7B7_9ACTN)

HSP 1 Score: 194 bits (493), Expect = 3.450e-52
Identity = 108/167 (64.67%), Postives = 122/167 (73.05%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAE 167
            ALTLALDEARA++GA RLA VDGVLGTLLDLVAV+AGWE AFEAA G+AL AVIV   DTAR +L  L+ GD TGAVLALG        G + + + V GT   VD+LLD LLG     DGDW+AA D  LA P + VVTR GDRFG  GWRIG++G GATGAALAE
Sbjct:  485 ALTLALDEARARSGAQRLATVDGVLGTLLDLVAVEAGWEAAFEAAAGDALTAVIVDGTDTARLALTELASGDXTGAVLALGSRTGTRAEGAEFVXSHVSGTTPAVDDLLDVLLGDAITADGDWQAALDQALAHPGQVVVTRTGDRFGARGWRIGSAGPGATGAALAE 651          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A3M2GZE6_ACTSX (Chromosome partition protein Smc n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GZE6_ACTSX)

HSP 1 Score: 192 bits (489), Expect = 1.190e-51
Identity = 108/174 (62.07%), Postives = 124/174 (71.26%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGG---GVRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEER 171
            AL LALD ARA+AG+ RL D+DG+LG+LLDLV VDAGWE AFE+AVG+AL AV+V DPD ARR+L+RL+     GAVLALG    G  R+D  G+++R  VRG   GVD LLD LL    VVDGDW AA D  LA P   VVTR GDRF    WR+G   TGATGAALAEAE R
Sbjct:  485 ALALALDSARARAGSDRLGDLDGMLGSLLDLVEVDAGWEAAFESAVGDALAAVVVADPDVARRALERLTAEGEAGAVLALGASGAGTPRADGPGEALRRHVRGLAPGVDALLDVLLHDAVVVDGDWTAAVDVALAHPDLVVVTRGGDRFAAGTWRLGQGATGATGAALAEAEAR 658          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A8F4J735_9ACTN (Chromosome partition protein Smc n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J735_9ACTN)

HSP 1 Score: 189 bits (479), Expect = 2.570e-50
Identity = 109/179 (60.89%), Postives = 128/179 (71.51%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSG--GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERV-AATQ 176
            AL LALD+ARA+AGA RLA +DGV+GTLLD+V VD GWE AFEAA GEA+ AV+V   D+ RR+L  L  GDA GAVLALG G  R   G  G+++R  VRG + GVD LLD L+G    V  DW AA D  LA+P   VVTR GDRFGP GWR+GA+G+GATGAAL EA  R  AAT+
Sbjct:  485 ALALALDQARARAGAERLASIDGVVGTLLDVVEVDPGWEPAFEAAAGEAIAAVVVDSVDSGRRALAELRAGDAAGAVLALGAGRNRLPLGSDGEAVRDHVRGIRPGVDALLDVLVGSCVAV-ADWTAAVDVALANPDAVVVTRTGDRFGPTGWRVGATGSGATGAALEEARTRADAATE 662          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A7X7HT86_9ACTN (Chromosome partition protein Smc n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HT86_9ACTN)

HSP 1 Score: 182 bits (463), Expect = 3.560e-48
Identity = 101/159 (63.52%), Postives = 118/159 (74.21%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGG--VRRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASG 157
            AL  ALD+ARA AGA RLA V GV+GTLLDLV VD GWE AFEAA GEA+ AV+V   DTARR+L  L DG+A+GAV+ALG    +  S SGG+ +R  VRG + GVDELLDAL+G   VV GDW +A DA LADP   VVTR+GDRFGP GWR+G+ G
Sbjct:  502 ALAQALDQARAAAGAERLAGVPGVVGTLLDLVEVDPGWEDAFEAAAGEAIAAVVVDSVDTARRALSELRDGNASGAVVALGAARSIPASSSGGERVRAHVRGIRDGVDELLDALVGSA-VVAGDWASAVDASLADPGSVVVTRSGDRFGPTGWRLGSGG 659          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: UPI001C63B18D (chromosome segregation protein SMC n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C63B18D)

HSP 1 Score: 182 bits (463), Expect = 3.560e-48
Identity = 110/177 (62.15%), Postives = 127/177 (71.75%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLAL--GGGVRRSDSG----GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEER 171
            AL LALDEARA+AGA RLA V GVLGTLLDLVAVD GWE AFEAA G ALGAV+V   + ARR+L+ L+ G+  GAV+ L    G  R  S     G+++R  VR    GV+ LLDAL+G   VVD  W  A DAVLA P   VVTRAGDRF PDGWR+GA+G+GATGAALAEA+ER
Sbjct:  496 ALGLALDEARARAGAERLAGVSGVLGTLLDLVAVDEGWEAAFEAAAGAALGAVVVDGVEGARRALETLAAGELAGAVVPLTSASGPARDASDAIRDGEALRPHVRAVAPGVEGLLDALVGSAVVVDA-WPDAVDAVLAAPGTVVVTRAGDRFAPDGWRVGAAGSGATGAALAEAQER 671          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A359F0V0_9ACTN (SMC hinge domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F0V0_9ACTN)

HSP 1 Score: 175 bits (444), Expect = 1.130e-47
Identity = 100/172 (58.14%), Postives = 123/172 (71.51%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGV--RRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEE 170
            AL+LALD+AR +AGAA LAD+DGV+GTLLD+V VD GWE AFEAA GEAL AV+V D   AR++L  L +G+ TGAVLALG G       + G SIR +VRG + GVD+LLD L+G+   V G   A  DA ++ P+  VVT+AGDRF   GWR+G +G GATGAAL EA E
Sbjct:  301 ALSLALDQARQRAGAAHLADLDGVIGTLLDVVEVDPGWETAFEAAAGEALAAVVVADRTVARQALAALEEGELTGAVLALGTGHVGAAPPAIGTSIRAKVRGIRPGVDDLLDLLVGNAVAVSGGIEALFDAAVSHPTAVVVTQAGDRFAATGWRVGGTGGGATGAALVEATE 472          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A382U9S2_9ZZZZ (SMC hinge domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382U9S2_9ZZZZ)

HSP 1 Score: 170 bits (430), Expect = 1.950e-47
Identity = 97/168 (57.74%), Postives = 117/168 (69.64%), Query Frame = 0
Query:    7 DEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGV--RRSDSGGDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERV 172
            DEAR+QAGAA LA ++GVLGTLLDLV VD G++ AFEAA G+AL AV+V  P+ AR +++ L  GD + AVLAL  GV  + +   G+ IR RVR  + GVD LLD LLGH  +VDG+     D  LA P   +VTR GDRFGP GWRIGA   GATGAAL EAE R+
Sbjct:    1 DEARSQAGAAHLAGIEGVLGTLLDLVEVDDGYQAAFEAAAGDALDAVVVDGPERARMAVEALRRGDFSAAVLALDNGVPGQPAPRVGEPIRPRVRARRDGVDALLDRLLGHAVLVDGEPDEVVDVALAHPDAVIVTRVGDRFGPTGWRIGAGRRGATGAALEEAEARL 168          
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Match: A0A5Q2RGT4_9ACTN (Chromosome partition protein Smc n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGT4_9ACTN)

HSP 1 Score: 179 bits (455), Expect = 4.140e-47
Identity = 146/309 (47.25%), Postives = 170/309 (55.02%), Query Frame = 0
Query:    1 ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEALGAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSG---GDSIRTRVRGTQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDGWRIGASGTGATGAALAEAEERVAATQTGXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETALPVLEADETESLEKGRRLAAARADIETRAAEVCSLRTDIEVRSA 306
            AL +ALD ARA+AGA RL+ VDGV+GTLLD+V VDAGWE AFEAA G+A+ AV+V   D  RR+LD L  GD  GAVLALG     + +    G+ +R  VR     V+ LLD L+G    VDG W AA DA L  P   VVTR G RFG  GWRIG +GTGATGAAL EA ERVAA    XXXXXXXXXXXXXXXXX XXXX                                                           E  LP+LE +E E +E+G+ LAAAR  +E R A + S R    VR+A
Sbjct:  485 ALGMALDAARARAGAERLSGVDGVVGTLLDVVEVDAGWEAAFEAAAGDAITAVVVDGVDAGRRALDALVSGDTQGAVLALGARHAAAPAAPPIGEPVRRHVRSANRDVEALLDQLIGAAVAVDGGWSAAVDAALGHPGAVVVTRDGSRFGASGWRIGVAGTGATGAALEEANERVAAXXXXXXXXXXXXXXXXXXXXXXXXXXDAIAKELDANDGLLSAAGDALQRVETERRDATTQGEELRSRRDEQLARLERDRARRRELEATLPMLEDEEAERIEQGKALAAARTRLEQRTATLTSRRXXXXVRAA 793          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81445.19053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WTS4_9ACTN2.200e-7354.33AAA family ATPase (Fragment) n=1 Tax=Actinomycetia... [more]
A0A7W0KR38_9ACTN7.560e-5362.50AAA family ATPase n=1 Tax=Acidimicrobiia bacterium... [more]
A0A2D6U7B7_9ACTN3.450e-5264.67Chromosome partition protein Smc n=7 Tax=Acidimicr... [more]
A0A3M2GZE6_ACTSX1.190e-5162.07Chromosome partition protein Smc n=1 Tax=Actinomyc... [more]
A0A8F4J735_9ACTN2.570e-5060.89Chromosome partition protein Smc n=1 Tax=Aquihabit... [more]
A0A7X7HT86_9ACTN3.560e-4863.52Chromosome partition protein Smc n=1 Tax=Acidimicr... [more]
UPI001C63B18D3.560e-4862.15chromosome segregation protein SMC n=1 Tax=Iamia s... [more]
A0A359F0V0_9ACTN1.130e-4758.14SMC hinge domain-containing protein (Fragment) n=1... [more]
A0A382U9S2_9ZZZZ1.950e-4757.74SMC hinge domain-containing protein (Fragment) n=1... [more]
A0A5Q2RGT4_9ACTN4.140e-4747.25Chromosome partition protein Smc n=1 Tax=Actinomar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..269
NoneNo IPR availableGENE3D3.30.70.1620coord: 82..158
e-value: 8.2E-9
score: 36.9
NoneNo IPR availableGENE3D1.20.1060.20coord: 20..81
e-value: 8.2E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR43941FAMILY NOT NAMEDcoord: 10..302
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 166..272
IPR010935SMCs flexible hingeSMARTSM00968SMC_hinge_2coord: 22..129
e-value: 7.4E-7
score: 38.8
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 22..78
e-value: 1.3E-11
score: 44.8
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 18..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81445contigM-pyrifera_M_contig81445:12..929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81445.19053.1mRNA_M-pyrifera_M_contig81445.19053.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81445 12..929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81445.19053.1 ID=prot_M-pyrifera_M_contig81445.19053.1|Name=mRNA_M-pyrifera_M_contig81445.19053.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=306bp
ALTLALDEARAQAGAARLADVDGVLGTLLDLVAVDAGWELAFEAAVGEAL
GAVIVRDPDTARRSLDRLSDGDATGAVLALGGGVRRSDSGGDSIRTRVRG
TQSGVDELLDALLGHVGVVDGDWRAAADAVLADPSRTVVTRAGDRFGPDG
WRIGASGTGATGAALAEAEERVAATQTGCAAAAEAVADARRALDERTAAA
TDLTERLDGIASGLTDAADALQRIEADRRDITTETDALENRLEELTLRVD
RESARVEELETALPVLEADETESLEKGRRLAAARADIETRAAEVCSLRTD
IEVRSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010935SMC_hinge
IPR036277SMC_hinge_sf