prot_M-pyrifera_M_contig81192.18991.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81192.18991.1
Unique Nameprot_M-pyrifera_M_contig81192.18991.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81192.18991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 129..161
e-value: 16.0
score: 13.2
coord: 21..54
e-value: 140.0
score: 4.8
coord: 58..91
e-value: 79.0
score: 7.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..161
e-value: 1.7E-21
score: 78.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..160
NoneNo IPR availablePFAMPF13431TPR_17coord: 118..150
e-value: 4.3E-5
score: 23.6
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 110..159
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 21..161
score: 16.233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81192contigM-pyrifera_M_contig81192:26..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81192.18991.1mRNA_M-pyrifera_M_contig81192.18991.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81192 26..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81192.18991.1 ID=prot_M-pyrifera_M_contig81192.18991.1|Name=mRNA_M-pyrifera_M_contig81192.18991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
NAARLAKRLVERATGCGMHKGEVWQTRGAVLLELGDCEHAAVEFQRCVDT
HTSAAYDSYCHSLIGVAKNTCGDLAGAEEAFNRATAHPDSSANSLSNAAN
FFLKSTDPKHREKAVLLHRRAVAKDPKHPLLINNLANALEITGDLRQAEQ
LYAKALSLAPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom