prot_M-pyrifera_M_contig81048.18957.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81048.18957.1
Unique Nameprot_M-pyrifera_M_contig81048.18957.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
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BLAST of mRNA_M-pyrifera_M_contig81048.18957.1 vs. uniprot
Match: A0A6H5KW21_9PHAE (Exportin-T n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW21_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.460e-38
Identity = 90/178 (50.56%), Postives = 101/178 (56.74%), Query Frame = 0 
Query:    1 VTQLLNQLTIEYGPKSAQLLDGALLPFIRRTHDLMPGPGG--------------------------------------------------------------EAE-LLAHEVAERAGIRKLYLSLLQHLSSNGLAGVLASPTNGACLDGVLRSVLAGISGDEDASTKKTCFYIFSLLL 115
            V Q+LNQLTIEYGPKSAQLLDGAL+PFIRRT+ L PG G                                                               EA+ LLAHEVAERAG +KL  S++QH+SSNGLAGVL+SPTN   LDGVLRSV+ G+SG EDASTKKTC YIFSLLL
Sbjct:  269 VAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLL 446
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BLAST of mRNA_M-pyrifera_M_contig81048.18957.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 4.360e-38
Identity = 90/177 (50.85%), Postives = 101/177 (57.06%), Query Frame = 0 
Query:    1 VTQLLNQLTIEYGPKSAQLLDGALLPFIRRTHDLMPGPGG-------------------------------------------------------------EAE-LLAHEVAERAGIRKLYLSLLQHLSSNGLAGVLASPTNGACLDGVLRSVLAGISGDEDASTKKTCFYIFSLLL 115
            V Q+LNQLTIEYGPKSAQLLDGAL+PFIRRT+ L PG G                                                              EA+ LLAHEVAERAG +KL  S++QH+SSNGLAGVL+SPTN   LDGVLRSV+ G+SG EDASTKKTC YIFSLLL
Sbjct:  801 VAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPNGTTAELPXXXXXXXXXXXXXXXXXXXGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLL 977
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BLAST of mRNA_M-pyrifera_M_contig81048.18957.1 vs. uniprot
Match: B7G7L1_PHATC (Exportin-T n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7L1_PHATC)

HSP 1 Score: 73.9 bits (180), Expect = 5.330e-13
Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 0 
Query:    1 VTQLLNQLTIEYGPKSAQLLDGALLPFIRRTHDLMPGP---GGEAELLAHEVAERAGIRKLYLSLLQHLSSNGLAGVLASPTNGACLDGVLRSVLAGISGDEDASTKKTCFYIF 111
            V+Q+ NQL I++   S  ++DGAL+PF+R+ + L+P      G +++  H   E+  I+KL   +LQH+ ++  + VL SPTN   L+ VLRS+  G     D   +KTC   F
Sbjct:  799 VSQIFNQLCIKFKEASVPVIDGALMPFLRKCYALVPATDDVAGTSDVPPHLRTEQLSIQKLTFVVLQHIVTHNASAVLMSPTNVGNLESVLRSMSDGAVYVTDPIVQKTCVKFF 912
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81048.18957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW21_9PHAE2.460e-3850.56Exportin-T n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7FNT8_ECTSI4.360e-3850.85Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
B7G7L1_PHATC5.330e-1336.84Exportin-T n=1 Tax=Phaeodactylum tricornutum (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..115
e-value: 1.1E-15
score: 58.4
IPR040017Exportin-TPANTHERPTHR15952EXPORTIN-T/LOS1coord: 2..112
NoneNo IPR availablePANTHERPTHR15952:SF11EXPORTIN-Tcoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81048contigM-pyrifera_M_contig81048:237..773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81048.18957.1mRNA_M-pyrifera_M_contig81048.18957.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81048 237..773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81048.18957.1 ID=prot_M-pyrifera_M_contig81048.18957.1|Name=mRNA_M-pyrifera_M_contig81048.18957.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
VTQLLNQLTIEYGPKSAQLLDGALLPFIRRTHDLMPGPGGEAELLAHEVA
ERAGIRKLYLSLLQHLSSNGLAGVLASPTNGACLDGVLRSVLAGISGDED
ASTKKTCFYIFSLLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR040017XPOT