prot_M-pyrifera_M_contig80950.18930.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80950.18930.1
Unique Nameprot_M-pyrifera_M_contig80950.18930.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A7J9WLY1_9ACTN (Histidine kinase n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WLY1_9ACTN)

HSP 1 Score: 171 bits (432), Expect = 6.280e-47
Identity = 99/215 (46.05%), Postives = 139/215 (64.65%), Query Frame = 0
Query:    4 RVITTSLETTILGAPVTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARRGWVHPVGIRAVEPVRIRG 217
            RV+  + + TI      +  +S +  +  +LD + R +W+  P+LVA    +++L T RALRPVD+++R+V AI+    GDRVP P   DEI +LA+TMN ML RL+ S Q QR+FV+D SHELR+P A  RA+++   A+ +  DW  TA  V+AEQE L++LVDDLL LS+MDE G    +D+DLD +V  EARR     V + A +PVR RG
Sbjct:  158 RVVAVAQDLTIGDDVARVGVSSPLRPVQDSLDTLRRALWVVVPLLVAAVGVLSWLTTTRALRPVDAITRRVRAISHTTMGDRVPVPDRNDEIQRLAITMNDMLKRLDRSQQRQRQFVADASHELRSPIAASRAQLDVARADPDAADWPATADVVIAEQEHLTQLVDDLLALSQMDEHGVGEIVDVDLDDIVAAEARRPRDIAVRVTAPKPVRTRG 372          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A6G0A309_9ACTN (Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A309_9ACTN)

HSP 1 Score: 163 bits (412), Expect = 3.030e-44
Identity = 90/181 (49.72%), Postives = 125/181 (69.06%), Query Frame = 0
Query:   20 TITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARR 199
            T+TA + + ++  ++D V   +WI+ PVLV   AA+ ++ TGRAL PV++++R+VE IT     +RVPEP + DE+  LA TMN MLDRLE SA  QR+FVSD SHELR+P A IRA++E  L   E  +W + AR+VL E ERL ++V DLL L+R+DEG P    ++DLD ++ EEA R
Sbjct:  164 TLTAATSLDTVSQSVDKVRGALWISIPVLVGFIAAIAWVMTGRALSPVNAITRRVEEITGTTLHERVPEPDSHDEVAHLARTMNSMLDRLETSASRQRQFVSDASHELRSPVASIRAQLEVALLHPEAAEWDDVARAVLDEDERLERVVSDLLTLARLDEGTPRMVAELDLDDVIHEEAAR 344          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A7X6P109_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P109_9ACTN)

HSP 1 Score: 155 bits (393), Expect = 6.430e-41
Identity = 86/200 (43.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   19 VTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARRGWVHPVGIRAVEPVRIRG 217
            V ++  S +A +   +D+V   +  A P LV   A M ++ TGRALRPV +++ +   I++     RVP P+T DEI QLA TMN ML+RLED++++Q+RF+SD SHELR+P A IR ++ET L   E+ DW+   R+VLAE +RLS LVD+LL L+R++EG   H  ++D+D L+ ++  R    P+    V   R+ G
Sbjct:  243 VVLSVASPLAQVKRTVDEVRGALSFAVPSLVGAVAIMAWMMTGRALRPVQAITNRAREISATTLDQRVPVPQTDDEIGQLACTMNAMLNRLEDASESQKRFISDASHELRSPVASIRLQLETALMRPESTDWEAVGRTVLAEDQRLSSLVDNLLALARLEEGQRRHHSEVDVDELIHDQLARPRRVPIDRSGVLAGRVYG 442          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: UPI001B0293AA (HAMP domain-containing histidine kinase n=1 Tax=Cellulomonas sp. TaxID=40001 RepID=UPI001B0293AA)

HSP 1 Score: 153 bits (387), Expect = 1.020e-40
Identity = 91/192 (47.40%), Postives = 123/192 (64.06%), Query Frame = 0
Query:   36 DVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRI-DIDLDALVQEEARRGWV--HPVGIRA---VEPVRIRGEER 220
            D  + + +A P LV +  A+TY+ TGRALRPV+ + R+   I    +G R+  PRTGDEI +LAVT+NGMLDRL D+ Q Q RFV+D SHELR+P A +RAE++  L +  + DW  TA +V    ER+ +LVDDLL+L+R  EGG   R  D+DLD +V+   R G+    P G+R      P R+RGE R
Sbjct:  158 DAAQALLVAVPALVLVVGAVTYVLTGRALRPVEQIRRRSAQIGDTDAGARIEVPRTGDEIARLAVTLNGMLDRLHDAHQAQVRFVADASHELRSPLAAVRAELDVALRQPNSADWVRTAHAVAGSNERMQQLVDDLLVLTRSAEGGASQRDQDVDLDDVVE---RVGFALRPPPGVRVEVVTRPARVRGEPR 346          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A359F1M8_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F1M8_9ACTN)

HSP 1 Score: 149 bits (377), Expect = 3.580e-39
Identity = 85/185 (45.95%), Postives = 119/185 (64.32%), Query Frame = 0
Query:   18 PVTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARRGW 201
            P+T++  S +  I   +D V  ++  A P +V   A + +  TGRALRPV +++ +V+ IT +    RVPEP T DEI  LA TMN MLDRLE +A  QRRF+SD SHELR+P   IRA++ET L   E+ +W E  ++VLAE ERL  LVD+LL LSR++EG      ++DLD +V ++  R +
Sbjct:  154 PMTLSVASSLEPIRRTVDRVANSLVFAVPSMVGAVALLAWFMTGRALRPVSAITGRVQEITGSTLDQRVPEPETEDEIADLARTMNAMLDRLESAADAQRRFMSDASHELRSPVTSIRAQLETALLRPESTNWTEVGQTVLAEDERLGALVDNLLALSRLEEGVRRPTSEVDLDEIVHDQLIRSF 338          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: UPI0010C046D7 (ATP-binding protein n=2 Tax=Intrasporangiaceae TaxID=85021 RepID=UPI0010C046D7)

HSP 1 Score: 147 bits (372), Expect = 1.810e-38
Identity = 90/209 (43.06%), Postives = 135/209 (64.59%), Query Frame = 0
Query:   16 GAPVTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEND-WQETARSVLAEQERLSKLVDDLLLLSRMDEGG-PVHRIDIDLDALVQEEARR-GWVHPVGIRA-VEPVRIRGEER 220
            GA  T+   + +   + A++ V   ++   P+L+ L    T++  GRALRPV+ +  +V +IT+AR  +RVP PR+GDE+ +LA TMN MLDRL+ +   QRRF++D SHELR+P + +   +E   A+     W+ET  ++ AE ER+S+LV DLLLL+  D+ G  + R+D+DLD LV  EARR   +H V +RA + PVR+RG+ R
Sbjct:  150 GADYTVVVAAPLKQREEAVETVLFYLFAGIPLLLLLVGGATWVLVGRALRPVERIRSRVRSITAARLDERVPVPRSGDEVARLAETMNEMLDRLDRAHGEQRRFLADASHELRSPLSTVIVGLEVAAADPSGQVWRETHPTMHAEAERMSELVHDLLLLAEADDTGLRLDRVDVDLDDLVDAEARRLRALHGVEVRAQIAPVRVRGDAR 358          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A2W2G2T8_9ACTN (Histidine kinase n=2 Tax=Nonomuraea aridisoli TaxID=2070368 RepID=A0A2W2G2T8_9ACTN)

HSP 1 Score: 145 bits (367), Expect = 9.590e-38
Identity = 82/182 (45.05%), Postives = 119/182 (65.38%), Query Frame = 0
Query:   18 PVTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEA-ENDWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEAR 198
            PVT+   S ++ +D AL  +   V++  P+++ +  A+T+ A G ALRPV+ +S ++  IT      RVP P TGDEI+ LA T N  LDRLE SA+TQRRFV+D SHELR+P + +RA++E   A   E DW+ T    LA  +RL+ +VD+LL+L+R+D G  V R  +DL  +V+E+AR
Sbjct:  152 PVTVYGASSLSDVDRALTWINLFVFVGSPLVLGIVGAITWAAVGSALRPVERISAELAEITGRDISRRVPVPDTGDEISSLARTTNHTLDRLERSAETQRRFVADASHELRSPISALRAQLEVANAYPDETDWKATGARALAAADRLATIVDELLMLARLDAGAVVPRRVVDLCRVVEEQAR 333          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A8F4FTK7_9ACTN (HAMP domain-containing histidine kinase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FTK7_9ACTN)

HSP 1 Score: 145 bits (367), Expect = 1.970e-37
Identity = 90/197 (45.69%), Postives = 121/197 (61.42%), Query Frame = 0
Query:    4 RVITTSLETTILGAPVTITATSRVASIDAALDDVTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARR 199
            R +  S   T+      + A   V   + +++ V   +++A P+LVA  A+ T+  TGRALRPV+++  + EAI +  +G RVPEP +GDE+  LA T+N MLDRLE ++  QRRFVSD SHELR+P A IR  +E   ++ E  D       VLAE  RL  LVDDLLLL+R+DEG       +DLD LV EEARR
Sbjct:  189 RFVVVSEPATVAQGRYVVLAARSVDPAEDSVEAVRNLLFVAIPLLVAAVASTTWFVTGRALRPVEAIRAEAEAIGATAAGRRVPEPASGDEVALLARTLNDMLDRLEQASDRQRRFVSDASHELRSPIATIRNLVEVARSDPEGLDVDVLTAGVLAEDLRLQHLVDDLLLLARLDEGRREPATAVDLDDLVFEEARR 385          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: A0A2A7N9F4_MYCAG (Histidine kinase n=2 Tax=Mycolicibacterium agri TaxID=36811 RepID=A0A2A7N9F4_MYCAG)

HSP 1 Score: 144 bits (363), Expect = 2.100e-37
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 0
Query:   38 TRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAEN-DWQETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARR 199
            TR + I  PV+VAL    T+ A GRAL PV+++ R+V+ I++A+   RVP+P+  DEI +LA TMN ML+RLE++  +QRRFVSD SHELR+P   IR   E  LA  +     E    VLAEQ+R+ +LV+DLLLL+R DE  P+ R  +DLD L  EEARR
Sbjct:  137 TRLLIIGVPVMVALVGLTTWFAVGRALAPVEAIRREVDEISAAQLHRRVPQPKADDEIGRLAATMNRMLERLENARNSQRRFVSDASHELRSPITTIRQHAEVALAHPDRMTAAELGDVVLAEQQRMQRLVEDLLLLARADEHVPLSREAVDLDDLAFEEARR 299          
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Match: UPI00034577EC (HAMP domain-containing histidine kinase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034577EC)

HSP 1 Score: 145 bits (365), Expect = 4.000e-37
Identity = 93/223 (41.70%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    1 GTGRVITTSLETTILGAPVTITATSRVASIDAALDD-----VTRTVWIAGPVLVALAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAVTMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAENDWQETARSVLA-EQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARRGWVHPVGIRAVEPVRIRG 217
            G+G  I T  +   +   V +  T  + S DAA  D     V   +W+A P+L A  AA+ +L T RALRPV +++ + E I+      RVP P +GDEI+ LA T+N MLDRLE   + +RRF+SD SHELR+P AV+R + E  L+  +    E   SV+A E  RLS ++DDLL L+R DEG     +D+DLD +V  EA R    PV    V   R+ G
Sbjct:  189 GSGTFIETEPDARTIAGVVEVDDTRLLVSADAAAVDRSVGRVQLGLWLAVPILTAAVAAVAWLLTSRALRPVAAITERAETISGGSLDARVPVPNSGDEISTLATTVNEMLDRLESDDRARRRFISDASHELRSPVAVLRNDAEVALSHPDTTDVEQLASVMAGESARLSTIIDDLLALARHDEGVVASFVDVDLDDIVLAEASRSRRVPVDASRVSAGRVHG 411          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80950.18930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J9WLY1_9ACTN6.280e-4746.05Histidine kinase n=1 Tax=Nitriliruptorales bacteri... [more]
A0A6G0A309_9ACTN3.030e-4449.72Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A7X6P109_9ACTN6.430e-4143.00Histidine kinase n=1 Tax=Actinomycetia bacterium T... [more]
UPI001B0293AA1.020e-4047.40HAMP domain-containing histidine kinase n=1 Tax=Ce... [more]
A0A359F1M8_9ACTN3.580e-3945.95Histidine kinase n=1 Tax=Acidimicrobiaceae bacteri... [more]
UPI0010C046D71.810e-3843.06ATP-binding protein n=2 Tax=Intrasporangiaceae Tax... [more]
A0A2W2G2T8_9ACTN9.590e-3845.05Histidine kinase n=2 Tax=Nonomuraea aridisoli TaxI... [more]
A0A8F4FTK7_9ACTN1.970e-3745.69HAMP domain-containing histidine kinase n=1 Tax=Aq... [more]
A0A2A7N9F4_MYCAG2.100e-3750.92Histidine kinase n=2 Tax=Mycolicibacterium agri Ta... [more]
UPI00034577EC4.000e-3741.70HAMP domain-containing histidine kinase n=1 Tax=Il... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003660HAMP domainSMARTSM00304HAMP_11coord: 61..114
e-value: 2.1E-9
score: 47.2
IPR003660HAMP domainPFAMPF00672HAMPcoord: 59..111
e-value: 7.2E-10
score: 39.1
IPR003660HAMP domainPROSITEPS50885HAMPcoord: 61..114
score: 9.468
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainSMARTSM00388HisKA_10coord: 115..179
e-value: 5.6E-14
score: 62.5
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainPFAMPF00512HisKAcoord: 116..179
e-value: 2.2E-13
score: 50.0
NoneNo IPR availableGENE3D1.10.287.130coord: 65..179
e-value: 4.2E-29
score: 103.0
NoneNo IPR availablePANTHERPTHR45436FAMILY NOT NAMEDcoord: 18..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..220
NoneNo IPR availableSUPERFAMILY158472HAMP domain-likecoord: 63..111
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilySUPERFAMILY47384Homodimeric domain of signal transducing histidine kinasecoord: 98..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80950contigM-pyrifera_M_contig80950:278..937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80950.18930.1mRNA_M-pyrifera_M_contig80950.18930.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80950 278..937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80950.18930.1 ID=prot_M-pyrifera_M_contig80950.18930.1|Name=mRNA_M-pyrifera_M_contig80950.18930.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
GTGRVITTSLETTILGAPVTITATSRVASIDAALDDVTRTVWIAGPVLVA
LAAAMTYLATGRALRPVDSLSRQVEAITSARSGDRVPEPRTGDEINQLAV
TMNGMLDRLEDSAQTQRRFVSDVSHELRTPAAVIRAEIETGLAEAENDWQ
ETARSVLAEQERLSKLVDDLLLLSRMDEGGPVHRIDIDLDALVQEEARRG
WVHPVGIRAVEPVRIRGEER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003660HAMP_dom
IPR003661HisK_dim/P
IPR036097HisK_dim/P_sf