prot_M-pyrifera_M_contig80923.18926.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80923.18926.1
Unique Nameprot_M-pyrifera_M_contig80923.18926.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length68
Homology
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BLAST of mRNA_M-pyrifera_M_contig80923.18926.1 vs. uniprot
Match: A0A358A500_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A500_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 2.660e-16
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:    1 VSVDTRTKGRRLDGYTRQTVDGHQFLLDPDLLKLPIELTITTGGLFGRGLSATADGLNGAACPIELL 67
            +SVDTR  GRRLD Y R+ V     L+D DL +LP+E+T+   GL GRGL    DG++GA CPI L+
Sbjct:    1 MSVDTRATGRRLDIYHRKQVGDVVILIDRDLARLPVEVTVMKSGLLGRGLGVHVDGVDGAPCPINLV 67
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BLAST of mRNA_M-pyrifera_M_contig80923.18926.1 vs. uniprot
Match: A0A2D8GHZ1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHZ1_9ACTN)

HSP 1 Score: 72.8 bits (177), Expect = 1.540e-15
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    1 VSVDTRTKGRRLDGYTRQTVDGHQFLLDPDLLKLPIELTITTGGLFGRGLSATADGLNGAACPIELL 67
            +SVDTR  GRRLD Y +  V     L+D DL +LP+E+T+   GL GRG+    DG++GA CPI L+
Sbjct:    1 MSVDTRATGRRLDAYHQTQVGDIVVLIDRDLARLPVEVTVMKSGLLGRGVGVHVDGIDGALCPINLV 67
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BLAST of mRNA_M-pyrifera_M_contig80923.18926.1 vs. uniprot
Match: A0A2D8LVQ1_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LVQ1_9ACTN)

HSP 1 Score: 71.2 bits (173), Expect = 6.250e-15
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:    1 VSVDTRTKGRRLDGYTRQTVDGHQFLLDPDLLKLPIELTITTGGLFGRGLSATADGLNGAACPIELL 67
            +SVDTR  GRRLD Y R  +     L+D DL +L +E+T+   GL GRG+    DG++GA CPI L+
Sbjct:    1 MSVDTRATGRRLDSYHRTQIGDIVVLIDRDLARLSVEVTVMKSGLLGRGIGVHVDGVDGAPCPINLI 67
[Close]
BLAST of mRNA_M-pyrifera_M_contig80923.18926.1 vs. uniprot
Match: A0A2E0T267_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T267_9ACTN)

HSP 1 Score: 67.4 bits (163), Expect = 2.090e-13
Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:    1 VSVDTRTKGRRLDGYTRQTVDGHQFLLDPDLLKLPIELTITTGGLFGRGLSATADGLNGAACPIELL 67
            +SVDTR  GRRLD Y    V     L+D DL +L +E+T+   GL GRG     DG++GA CPI L+
Sbjct:    1 MSVDTRATGRRLDAYHXTQVGDIVVLIDHDLARLXVEVTVMKSGLXGRGXGVHVDGVDGAPCPINLV 67
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80923.18926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A358A500_9ACTN2.660e-1652.24Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2D8GHZ1_9ACTN1.540e-1549.25Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2D8LVQ1_9ACTN6.250e-1547.76Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
A0A2E0T267_9ACTN2.090e-1347.76Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80923contigM-pyrifera_M_contig80923:280..483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80923.18926.1mRNA_M-pyrifera_M_contig80923.18926.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80923 280..483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80923.18926.1 ID=prot_M-pyrifera_M_contig80923.18926.1|Name=mRNA_M-pyrifera_M_contig80923.18926.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
VSVDTRTKGRRLDGYTRQTVDGHQFLLDPDLLKLPIELTITTGGLFGRGL
SATADGLNGAACPIELL*
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