prot_M-pyrifera_M_contig8070.18887.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8070.18887.1
Unique Nameprot_M-pyrifera_M_contig8070.18887.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length265
Homology
BLAST of mRNA_M-pyrifera_M_contig8070.18887.1 vs. uniprot
Match: D7FZ55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ55_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 2.780e-106
Identity = 173/263 (65.78%), Postives = 198/263 (75.29%), Query Frame = 0
Query:    6 RAAKSLLPSFGVATAGAALGAVGVWSWPAPA-TAXXXXXXXXXXXXXXXTAIPP--RTGPMVAVYLDESSVEKLHREYPGTSRGRLRKVVLQYNPTDAQRGIYEPHFGGLATVQLTGEASSADRRALLASVSLAGKSVEPQSLSCAVDVTPGDFGGGPLGSAVLLEQIKQAGGGAAVPWKGSLPPLSAHGRDFPSEEGFYDKLDAPLTVTGSVCRADWVDGTTGRCRTLTEGGDKRTDGWTPQGCIICNTLEASPCRDIYKRF 265
            +A K + P  GVA  G   GA G+W+W +    A         XXXXXX    P  RTGPMVAVYLD+SS+EKL  EYPGT  GRLRKVV++Y+P+D QRG+YEP FGG ATV++TGEA S +R AL+ASVS AG SVEP SLSCAVDVTPGD GGGPLGS VL+EQIK+ G  A   WKG LPPLSAH RDFPSEEG Y+KLD PLT+TGS+CRADWV+  TG CRT T GG KR DGWTPQ C ICNTLE+SPCRDI+K+F
Sbjct:    3 QAVKRISPFAGVAAGGLVAGAAGLWAWRSKRDNAVKGDATTAPXXXXXXXXXXPLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKVTGEACSDNRLALVASVSSAGTSVEPPSLSCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWKGLLPPLSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEPMTGVCRTTTAGGGKREDGWTPQACSICNTLESSPCRDIHKKF 265          
BLAST of mRNA_M-pyrifera_M_contig8070.18887.1 vs. uniprot
Match: A0A6H5JUT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT1_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 1.060e-104
Identity = 165/262 (62.98%), Postives = 191/262 (72.90%), Query Frame = 0
Query:    6 RAAKSLLPSFGVATAGAALGAVGVWSWPAPATAXXXXXXXXXXXXXXXTAIPP--RTGPMVAVYLDESSVEKLHREYPGTSRGRLRKVVLQYNPTDAQRGIYEPHFGGLATVQLTGEASSADRRALLASVSLAGKSVEPQSLSCAVDVTPGDFGGGPLGSAVLLEQIKQAGGGAAVPWKGSLPPLSAHGRDFPSEEGFYDKLDAPLTVTGSVCRADWVDGTTGRCRTLTEGGDKRTDGWTPQGCIICNTLEASPCRDIYKRF 265
            +A K + P  GVA  G   GA G+W+W    +                   PP  RTGPMVAVYLD+SS+EKL  +YPGT+ GRLRKVV++Y+P+D QRG+YEP FG  ATV+LTGEASS +R AL+ASVS AG SVEP SLSCAVDVTPG+ GGGPLGS VL+EQIK+ G  A   WKG LP LSAH RDF SEEG Y+KLD PLT+TGS+CRADWV+G TG CRT T GG KR DGWTPQ C ICN+LE+SPCRDIYK F
Sbjct:    3 QAVKRISPIAGVAAGGLVAGAAGLWAW---RSMRDNEDIDDATTAPAPAPSPPLQRTGPMVAVYLDDSSIEKLQMKYPGTNPGRLRKVVIEYDPSDEQRGLYEPRFGDSATVKLTGEASSENRVALVASVSSAGTSVEPPSLSCAVDVTPGEVGGGPLGSTVLIEQIKRVGAVAEDSWKGLLPALSAHERDFLSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNSLESSPCRDIYKEF 261          
BLAST of mRNA_M-pyrifera_M_contig8070.18887.1 vs. uniprot
Match: D8LQJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ5_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 5.790e-47
Identity = 87/174 (50.00%), Postives = 108/174 (62.07%), Query Frame = 0
Query:  104 IYEPHFGGLATVQLTGEASSADRRALLASVSLAGKSVEPQSLSCAVDVTPGDF------------GGGPLGSAVLLEQIKQAGGGAAVPWKGSLPPLSAHGRDFPSEEGFYDKLDAPLTVTGSVCRADWVDGTTGRCRTLTEGGDKRTDGWTPQGCIICNTLEASPCRDIYKRF 265
            +Y   F G A V +TG+ASS  RRAL+ASVS AGK VEP SLS  +D++P               G GPL SAVL+EQ K+AG      W+G+LPP+ AH R FPSE G Y +L  P+TV G++CRADWVDG +  CR   EGG KR + W P  C IC     SPC+ I++RF
Sbjct:    1 MYRHLFSGKAEVTVTGDASSFARRALVASVSHAGKIVEPASLSATIDISPPAITDPEASAVAENDGPGPLASAVLIEQAKKAGATKEEMWEGTLPPMLAHDRRFPSEPGAYVRLKEPITVYGTICRADWVDGASNVCRDTLEGGQKREEDWEPSDCSICAFFSVSPCKGIFERF 174          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8070.18887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZ55_ECTSI2.780e-10665.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUT1_9PHAE1.060e-10462.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQJ5_ECTSI5.790e-4750.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8070contigM-pyrifera_M_contig8070:211..8295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8070.18887.1mRNA_M-pyrifera_M_contig8070.18887.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8070 211..8295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8070.18887.1 ID=prot_M-pyrifera_M_contig8070.18887.1|Name=mRNA_M-pyrifera_M_contig8070.18887.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
MSHPGRAAKSLLPSFGVATAGAALGAVGVWSWPAPATAAPTTPSTAATAT
AAATAIPPRTGPMVAVYLDESSVEKLHREYPGTSRGRLRKVVLQYNPTDA
QRGIYEPHFGGLATVQLTGEASSADRRALLASVSLAGKSVEPQSLSCAVD
VTPGDFGGGPLGSAVLLEQIKQAGGGAAVPWKGSLPPLSAHGRDFPSEEG
FYDKLDAPLTVTGSVCRADWVDGTTGRCRTLTEGGDKRTDGWTPQGCIIC
NTLEASPCRDIYKRF
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