prot_M-pyrifera_M_contig80434.18842.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80434.18842.1
Unique Nameprot_M-pyrifera_M_contig80434.18842.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
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BLAST of mRNA_M-pyrifera_M_contig80434.18842.1 vs. uniprot
Match: A0A2R5G3W2_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3W2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.780e-17
Identity = 57/170 (33.53%), Postives = 79/170 (46.47%), Query Frame = 0 
Query:    4 VKEWTDEHRERGMAILKALSFDGRRALRAAAVAAAGRAPSVPIIL---VRKYEGVDEDALIDLAWDLPSDSAPEAFFVLESCGPEGGAQHRAGTWTRLLVDPPSAKAKRAPACRCVLRGLRPNTGYVFRLRALNAAGGSPYAVGVVAAPPARPPAPVCLRASDSTALLAW 170
            V +W+   R   +  L+AL+   R   R  A+   G +P  P++    V ++   D    + L W     S    F+VLESCG EG   HR   +  +  DPPSA + +A A    LRGL     Y+FR+RA N  G SP+        PA P  PV    + +T  LAW
Sbjct:  766 VSKWSLSERMSALEGLEALAETNREISRTLALQTQGESPLCPVLELGPVHEFPEADRQTALMLRWRPREGSMFPTFYVLESCGREGSKSHRQHEFKEIFRDPPSAASGKAQAGEFTLRGLEAGVRYLFRIRAFNGYGSSPFTYASFLTAPAPPAVPVVKSLAPTTLTLAW 935
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80434.18842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2R5G3W2_9STRA2.780e-1733.53Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 42..139
e-value: 0.006
score: 25.8
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 41..154
score: 9.705
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 41..166
e-value: 3.0E-9
score: 38.9
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 41..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80434contigM-pyrifera_M_contig80434:210..908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80434.18842.1mRNA_M-pyrifera_M_contig80434.18842.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80434 210..908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80434.18842.1 ID=prot_M-pyrifera_M_contig80434.18842.1|Name=mRNA_M-pyrifera_M_contig80434.18842.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
MPTVKEWTDEHRERGMAILKALSFDGRRALRAAAVAAAGRAPSVPIILVR
KYEGVDEDALIDLAWDLPSDSAPEAFFVLESCGPEGGAQHRAGTWTRLLV
DPPSAKAKRAPACRCVLRGLRPNTGYVFRLRALNAAGGSPYAVGVVAAPP
ARPPAPVCLRASDSTALLAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR036116FN3_sf