prot_M-pyrifera_M_contig8030.18816.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8030.18816.1
Unique Nameprot_M-pyrifera_M_contig8030.18816.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
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BLAST of mRNA_M-pyrifera_M_contig8030.18816.1 vs. uniprot
Match: D8LM76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM76_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.160e-27
Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:    1 MPVWDRVQMSLGLGKWSYAGLGLALFIIFLNNWLGVGWLTRAMTPDFDTEGLVDIEQRGQQIQVMPMDDPSNLL 74
            MPVW++VQ +LGLG WSY GLGLA+FII LNN LGVGW T+ + P+++ + +++++Q+G+QIQ MP+DD SNLL
Sbjct:  142 MPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLL 215
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BLAST of mRNA_M-pyrifera_M_contig8030.18816.1 vs. uniprot
Match: A0A6H5KPT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT2_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.440e-26
Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:    1 MPVWDRVQMSLGLGKWSYAGLGLALFIIFLNNWLGVGWLTRAMTPDFDTEGLVDIEQRGQQIQVMPMDDPSNLL 74
            MPVW++VQ +LGLG WSY GLGLA+FII LNN LGVGW T+ + P+++ + +++++Q+G+QIQ MP+DD SNLL
Sbjct:  213 MPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLL 286
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8030.18816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM76_ECTSI3.160e-2759.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPT2_9PHAE1.440e-2659.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..34
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8030contigM-pyrifera_M_contig8030:9442..9666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8030.18816.1mRNA_M-pyrifera_M_contig8030.18816.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8030 9349..10273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8030.18816.1 ID=prot_M-pyrifera_M_contig8030.18816.1|Name=mRNA_M-pyrifera_M_contig8030.18816.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
MPVWDRVQMSLGLGKWSYAGLGLALFIIFLNNWLGVGWLTRAMTPDFDTE
GLVDIEQRGQQIQVMPMDDPSNLL*
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