prot_M-pyrifera_M_contig79696.18699.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79696.18699.1
Unique Nameprot_M-pyrifera_M_contig79696.18699.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: A0A7S4M3V5_9EUKA (DNA ligase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M3V5_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 4.730e-38
Identity = 75/141 (53.19%), Postives = 103/141 (73.05%), Query Frame = 0
Query:    5 RDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHFLDQPQ---LGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            + D++L  K LLCK D+RVYN+++KQLVKL+SR+L  SH D+L DLEKGD + TCK +  ++    D P+   L L+ VD FLEQLTTAT+EDDQLDI+S+   + TP +V+Y+ K++ HDLKINIG K+ L ALH   ++
Sbjct:   46 KGDVYLLMKFLLCKYDQRVYNIREKQLVKLMSRYLQCSHQDLLEDLEKGDHSQTCKSFIMQYKR--DHPRRSSLTLKMVDQFLEQLTTATKEDDQLDIISNFFDLCTPEDVRYVTKIMDHDLKINIGPKFALNALHPKGYE 184          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: UPI001F04B2E9 (DNA ligase 3-like isoform X1 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04B2E9)

HSP 1 Score: 121 bits (303), Expect = 3.690e-29
Identity = 69/137 (50.36%), Postives = 96/137 (70.07%), Query Frame = 0
Query:    7 DLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAH--FLDQPQLGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAF 141
            D++L  KLLL    KRVYNL+ KQLVKL S+ L  S  +M  DL+KGDV+ T K +F+   +   L Q  L L++VD+FL++++T TRED+Q + LS +    T  ++KY+I+LI HDLKIN GAK+VL+ALH DA+
Sbjct:  219 DIYLVVKLLLPSAVKRVYNLQNKQLVKLFSQILDCSLEEMTSDLDKGDVSETIKNFFETSINKTLLKQSCLTLQEVDAFLDKMSTLTREDEQQNELSKMTRRCTSTDLKYIIRLIKHDLKINAGAKHVLDALHTDAY 355          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: A0A177BC63_9BILA (DNA ligase n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177BC63_9BILA)

HSP 1 Score: 121 bits (303), Expect = 3.760e-29
Identity = 60/143 (41.96%), Postives = 100/143 (69.93%), Query Frame = 0
Query:    2 EGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHF--LDQPQLGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            +G + D++ F KLLL K+D R+Y L  KQ++K++S  LG +  DM  DL+ GDV++T +K+F  ++     ++  L ++++DSFL+++T  T E  Q  I ++IL   T ++V YLI+LI HDL+IN+G+KY LE+L++DA++
Sbjct:  417 DGYKGDVYTFMKLLLVKQDVRIYRLNSKQIIKVISLILGTNLEDMRQDLDNGDVSMTVEKFFDENSSIQPCEKSTLSIKEIDSFLDEMTVNTTEIKQKIIFTNILRRCTKMDVLYLIRLIKHDLRINLGSKYALESLYDDAYE 559          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: UPI0005CE888C (DNA ligase 3 n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CE888C)

HSP 1 Score: 120 bits (302), Expect = 5.170e-29
Identity = 64/143 (44.76%), Postives = 100/143 (69.93%), Query Frame = 0
Query:    1 QEGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHA--HFLDQPQLGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAF 141
            ++G   D+ L+C+LLL    KR+YNL+ K L+KL +R L      M+ DLE+GDVA T K +++R++   F  + +L L++VD FLE+L+T T+E++Q+    SIL   TP ++K +I+LI HDL+IN G K++LEA+H+DA+
Sbjct:  205 KDGFTGDIVLWCRLLLPGTAKRIYNLQSKALIKLFARILNEDEKLMIEDLEEGDVAQTIKTFYQRNSTIKFNMRSELTLQEVDEFLEKLSTLTKEEEQIYHFKSILRRCTPDDLKMIIRLIKHDLRINAGPKHILEAIHDDAY 347          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: UPI00109BE559 (DNA ligase 3-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE559)

HSP 1 Score: 120 bits (301), Expect = 6.720e-29
Identity = 68/144 (47.22%), Postives = 95/144 (65.97%), Query Frame = 0
Query:    1 QEGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHF--LDQPQLGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            Q+    DL+L  KL L   +KRVYNL+ KQLVKL S+ LG  H DM+ DLEKGDVA T   YF  +     L +  L  ++VD FL+ LT  ++E++Q+  L+ I    TP ++KY+I+LI HDL++N GAK+VLEA+H  A++
Sbjct:  228 QDNYTGDLYLLAKLFLPAVNKRVYNLQSKQLVKLFSQILGCDHDDMITDLEKGDVAETISNYFXGNTKCKPLKKSILTNQEVDEFLDSLTMLSKEEEQIRELTKISRKCTPNDLKYIIRLIKHDLRMNTGAKHVLEAIHPSAYE 371          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: UPI001FB396C4 (DNA ligase 3 isoform X1 n=8 Tax=Vespa TaxID=7443 RepID=UPI001FB396C4)

HSP 1 Score: 120 bits (301), Expect = 7.060e-29
Identity = 65/143 (45.45%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    2 EGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHFLDQPQ--LGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            +G + D+ L+CKLLL +  KR+YNL+ KQL+KL SR L      ML DLE+GD+A T + +F+        P+  L +++VD FLE L++ T+ED+Q+    SI+   T  ++K +I+LI HDL+IN G K++L A+HEDAFK
Sbjct:  238 DGFKSDIVLWCKLLLPQAAKRIYNLQSKQLIKLFSRILLQDEESMLEDLEQGDIAETIRLFFESSTAVKASPKSLLTIQEVDQFLEFLSSLTKEDEQIHHFKSIIDKCTGNDLKMIIRLIKHDLRINAGPKHILSAVHEDAFK 380          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: A0A1B6DWL9_9HEMI (DNA ligase n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DWL9_9HEMI)

HSP 1 Score: 119 bits (297), Expect = 9.300e-29
Identity = 65/144 (45.14%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    1 QEGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHFLDQPQ--LGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            ++G + DL L+C+LLL    KR+YNL+ KQLVKL SR    +   ML DLE+GDVA T   +F+++   L   +  L L+QVD+FLE+L+T T+E++Q+   + I +  T  ++K +I+LI HDL+IN G K++LEA+H DA++
Sbjct:  178 KDGFKGDLLLWCRLLLPGAVKRIYNLQSKQLVKLFSRIFNENQEKMLEDLEQGDVAETVGVFFEKNKKLLPAKKSLLTLQQVDNFLEELSTMTKEEEQMQHFTEIANKCTVNDLKIVIRLIKHDLRINAGPKHILEAVHPDAYQ 321          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: UPI001FB4392B (DNA ligase 3 isoform X6 n=1 Tax=Vespa velutina TaxID=202808 RepID=UPI001FB4392B)

HSP 1 Score: 119 bits (299), Expect = 1.280e-28
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = 0
Query:    3 GCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHFLDQPQ--LGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            G + D+ L+CKLLL +  KR+YNL+ KQL+KL SR L      ML DLE+GD+A T + +F+        P+  L +++VD FLE L++ T+ED+Q+    SI+   T  ++K +I+LI HDL+IN G K++L A+HEDAFK
Sbjct:    3 GFKSDIVLWCKLLLPQAAKRIYNLQSKQLIKLFSRILLQDEESMLEDLEQGDIAETIRLFFESSTAVKASPKSLLTIQEVDQFLEFLSSLTKEDEQIHHFKSIIDKCTGNDLKMIIRLIKHDLRINAGPKHILSAVHEDAFK 144          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: A0A482X3Q5_LAOST (DNA ligase n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482X3Q5_LAOST)

HSP 1 Score: 119 bits (299), Expect = 1.290e-28
Identity = 65/143 (45.45%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    2 EGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHFLDQPQ--LGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            +  + D+ L+C+LLL    KRVYNL+ KQLVKL S+       +ML DLEKGDVA T + +F++ + F+   +  L L++VD FLEQLT  T+ED+QL    SI    T  ++K +++L+ HDL+IN GAK++LE +H DA++
Sbjct:  203 DSFKGDIILWCRLLLPGFIKRVYNLQSKQLVKLFSKLFKQDQDEMLEDLEKGDVAETTRIFFEKSSVFIPSKKSLLTLQEVDEFLEQLTKLTKEDEQLSHFKSIAGRCTSNDLKMIVRLVKHDLRINAGAKHILEGVHPDAYQ 345          
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Match: A0A6P8HI92_ACTTE (DNA ligase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HI92_ACTTE)

HSP 1 Score: 119 bits (299), Expect = 1.300e-28
Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    2 EGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDLEKGDVALTCKKYFKRHAHF--LDQPQLGLRQVDSFLEQLTTATREDDQLDILSSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK 142
            +G   DLFL  KLLL   +KRVYNL+ KQL+KL S+ LG    +ML DLEKGDVA T   +F++      +++  L  ++VD FL+ LTT ++EDDQ+  L  I    T  ++KY+I+LI HDL++N GAK+VLEA+  DA+K
Sbjct:  225 DGYTGDLFLLAKLLLPGVNKRVYNLQSKQLIKLFSQILGSDQDEMLTDLEKGDVAETISDFFEQSLACKPVNKSTLSNQEVDEFLDNLTTFSKEDDQMRELRKITRKCTVNDLKYIIRLIKHDLRMNTGAKHVLEAIDPDAYK 367          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79696.18699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M3V5_9EUKA4.730e-3853.19DNA ligase (Fragment) n=1 Tax=Vannella sp. CB-2014... [more]
UPI001F04B2E93.690e-2950.36DNA ligase 3-like isoform X1 n=3 Tax=Xenia sp. Car... [more]
A0A177BC63_9BILA3.760e-2941.96DNA ligase n=1 Tax=Intoshia linei TaxID=1819745 Re... [more]
UPI0005CE888C5.170e-2944.76DNA ligase 3 n=1 Tax=Ceratosolen solmsi marchali T... [more]
UPI00109BE5596.720e-2947.22DNA ligase 3-like n=1 Tax=Exaiptasia diaphana TaxI... [more]
UPI001FB396C47.060e-2945.45DNA ligase 3 isoform X1 n=8 Tax=Vespa TaxID=7443 R... [more]
A0A1B6DWL9_9HEMI9.300e-2945.14DNA ligase n=1 Tax=Clastoptera arizonana TaxID=381... [more]
UPI001FB4392B1.280e-2845.77DNA ligase 3 isoform X6 n=1 Tax=Vespa velutina Tax... [more]
A0A482X3Q5_LAOST1.290e-2845.45DNA ligase n=1 Tax=Laodelphax striatellus TaxID=19... [more]
A0A6P8HI92_ACTTE1.300e-2848.25DNA ligase n=1 Tax=Actinia tenebrosa TaxID=6105 Re... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036599DNA ligase, ATP-dependent, N-terminal domain superfamilyGENE3D1.10.3260.10coord: 1..142
e-value: 4.7E-36
score: 126.5
IPR036599DNA ligase, ATP-dependent, N-terminal domain superfamilySUPERFAMILY117018ATP-dependent DNA ligase DNA-binding domaincoord: 25..136
IPR012308DNA ligase, ATP-dependent, N-terminalPFAMPF04675DNA_ligase_A_Ncoord: 5..137
e-value: 1.9E-30
score: 106.4
NoneNo IPR availablePANTHERPTHR45674:SF1DNA LIGASE 3coord: 5..142
NoneNo IPR availablePANTHERPTHR45674FAMILY NOT NAMEDcoord: 5..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79696contigM-pyrifera_M_contig79696:233..906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79696.18699.1mRNA_M-pyrifera_M_contig79696.18699.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79696 233..906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79696.18699.1 ID=prot_M-pyrifera_M_contig79696.18699.1|Name=mRNA_M-pyrifera_M_contig79696.18699.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
QEGCRDDLFLFCKLLLCKEDKRVYNLKKKQLVKLVSRHLGVSHADMLHDL
EKGDVALTCKKYFKRHAHFLDQPQLGLRQVDSFLEQLTTATREDDQLDIL
SSILSMATPIEVKYLIKLIIHDLKINIGAKYVLEALHEDAFK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036599DNA_ligase_N_sf
IPR012308DNA_ligase_ATP-dep_N