prot_M-pyrifera_M_contig79494.18660.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79494.18660.1
Unique Nameprot_M-pyrifera_M_contig79494.18660.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
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BLAST of mRNA_M-pyrifera_M_contig79494.18660.1 vs. uniprot
Match: A0A367JB58_RHIAZ (MICOS complex subunit MIC60 n=3 Tax=Rhizopus TaxID=4842 RepID=A0A367JB58_RHIAZ)

HSP 1 Score: 52.4 bits (124), Expect = 4.930e-5
Identity = 38/121 (31.40%), Postives = 65/121 (53.72%), Query Frame = 0 
Query:   18 GVATRRQLALRFEVVAREVERAALVPAGSGAVGELLASAVSALLWSESG-AQGAEGAAVSPKARKVLRTVHEARTAVAADDLHQAVQSLQAIQGYAAEPVKSWCQDATDRILVEQAIRVAK 137
            GV T  +LA+RFE VA+E+ R ALVP   G    +++S +S L++ +SG  +G +  ++  +A   L+           D+L  A + L  + G+  +  + W Q A   + V+QA+ VA+
Sbjct:  456 GVNTVSELAVRFEEVAQEIRRVALVPEDGGFGSHIISSLMSYLMFKKSGLVEGDDVESILARAEYYLKR----------DNLEYATRELNQLGGWPKKLARDWIQSARRHLEVKQALEVAE 566
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79494.18660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A367JB58_RHIAZ4.930e-531.40MICOS complex subunit MIC60 n=3 Tax=Rhizopus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019133Mitochondrial inner membrane protein MitofilinPFAMPF09731Mitofilincoord: 1..138
e-value: 2.3E-13
score: 49.9
IPR019133Mitochondrial inner membrane protein MitofilinPANTHERPTHR15415MITOFILINcoord: 1..142
NoneNo IPR availablePANTHERPTHR15415:SF7MICOS COMPLEX SUBUNIT MIC60coord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79494contigM-pyrifera_M_contig79494:410..856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79494.18660.1mRNA_M-pyrifera_M_contig79494.18660.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79494 410..856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79494.18660.1 ID=prot_M-pyrifera_M_contig79494.18660.1|Name=mRNA_M-pyrifera_M_contig79494.18660.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
VIASAVESLPDRVHMAGGVATRRQLALRFEVVAREVERAALVPAGSGAVG
ELLASAVSALLWSESGAQGAEGAAVSPKARKVLRTVHEARTAVAADDLHQ
AVQSLQAIQGYAAEPVKSWCQDATDRILVEQAIRVAKAATALETAALY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019133Mt-IM_prot_Mitofilin