prot_M-pyrifera_M_contig79493.18659.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79493.18659.1
Unique Nameprot_M-pyrifera_M_contig79493.18659.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length214
Homology
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BLAST of mRNA_M-pyrifera_M_contig79493.18659.1 vs. uniprot
Match: A0A7C2AKU8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2AKU8_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 3.720e-19
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 0 
Query:   15 LLTPSCSEAPPPPATALPALPEFELRDVVAARIAALEAELAAE-PVPT-DPAPDDLAEQVAGLVTFLTSAKGSLVDAAFEDVQRLGPAAVEPLVALYREELARAAEASETERRRSILRLLGDLDTPASAAFLAEVTSTERSALLRSTASWKLAGLGQDFVVPELLKQLTYEKDPDAVVWLVRALAAHGNYSGLSALNVLVA 213
            LL  SC    P PA   P  P    RDVVAARIA L+A+LA + PV   DP      E++ GL++   S+   +  A  E+   LG  A++ L A+  +    AAE      R   +  LG L +P SA  L  +  +      R+ A+W+LA   QD+VVP +L +L YE D D V+WL + LA +GN +GL AL+V+ A
Sbjct:   16 LLFGSCGGDAPHPA---PPAPPPPTRDVVAARIAELDADLAEDSPVEAIDP------ERIRGLISIALSSDRGMRLAGREEAAGLGDGAIDELEAILADSTVAAAE------REVAIEFLGLLASPRSAESLLTLLESSDEPWQRAHAAWRLASSDQDWVVPRMLLRLKYETDFDTVIWLAKTLAHYGNDAGLGALSVIAA 201
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79493.18659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C2AKU8_9BACT3.720e-1938.31Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.739
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 66..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79493contigM-pyrifera_M_contig79493:19..660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79493.18659.1mRNA_M-pyrifera_M_contig79493.18659.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79493 19..660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79493.18659.1 ID=prot_M-pyrifera_M_contig79493.18659.1|Name=mRNA_M-pyrifera_M_contig79493.18659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
MKACSTLALTLALGLLTPSCSEAPPPPATALPALPEFELRDVVAARIAAL
EAELAAEPVPTDPAPDDLAEQVAGLVTFLTSAKGSLVDAAFEDVQRLGPA
AVEPLVALYREELARAAEASETERRRSILRLLGDLDTPASAAFLAEVTST
ERSALLRSTASWKLAGLGQDFVVPELLKQLTYEKDPDAVVWLVRALAAHG
NYSGLSALNVLVAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold