prot_M-pyrifera_M_contig79429.18646.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79429.18646.1
Unique Nameprot_M-pyrifera_M_contig79429.18646.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length310
Homology
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BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Match: A0A5M9NP68_9VIBR (GGDEF domain-containing protein n=6 Tax=Vibrio TaxID=662 RepID=A0A5M9NP68_9VIBR)

HSP 1 Score: 65.5 bits (158), Expect = 3.720e-8
Identity = 58/220 (26.36%), Postives = 103/220 (46.82%), Query Frame = 0 
Query:   61 HHLNRSQALALELSDTTYLVLSKKW------------LGSILRYRSDYAGALEVYKEALTL-AEIMNFDDEIPKITQNIAMIFLDQNQHDLAIEYYKKSIAKIKDL-YTKSVCMTNLGL--AYLRSQQYDLALSTFMNSLDVCQMSNNVSCEISPIILITQTYLYQDKN--NEALSYGLATLEKRQAFVSKEDLVNIYNQIGLIYLNLEDFEPAHEYFIQ 262
            HH       AL     TYL L K +            +G++L+    Y  + +  KEAL L A+  N      ++  ++A ++L+Q+Q DLAI +++K+   + +  +   + +T+LGL  AY ++Q YDLA S  + SL+      N    I+  + ++   +++DK    EAL+Y    L   +     +       Q+  I+  L D++ A  Y+ Q
Sbjct:  201 HHFRSDYHTALN----TYLTLIKVFPKGHDISGVYNDIGNLLKELKQYEKSAQYLKEALALRADASNLMKA--QVHHSLADLYLNQSQSDLAIHHFEKAHRLLSESSHNYGIALTSLGLGKAYTQTQDYDLARSYLIESLEAANGLTNDGIRINAYLAVSD--MFEDKKLMAEALNYAEQALRLAEQVSRHKYTAQALLQLSEIHKALNDYQQAFIYYQQ 412
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BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Match: UPI001CF1F710 (tetratricopeptide repeat protein n=1 Tax=Clostridium sp. CS001 TaxID=2880648 RepID=UPI001CF1F710)

HSP 1 Score: 58.2 bits (139), Expect = 7.250e-6
Identity = 49/193 (25.39%), Postives = 83/193 (43.01%), Query Frame = 0 
Query:   86 LGSILRYRSDYAGALEVYKEALTLAEIMNFDDEIPKITQNIAMIFLDQNQHDLAIEYY---KKSIAKIKDLYTKSVCMTNLGLAYLRSQQYDLALSTFMNSLDVCQMSNNVSCEISPIILITQTYLYQDKNNEALSYGLATLEKRQAFVSKEDLVNIYNQIGLIYLNLEDFEPAHEYFIQCLELKDHIPAQKL 275
            LG     + DY  A   Y  ++ + + +N  + IP +  NIA+      Q+  A+ ++   ++     KD   +     N+   Y++  + DLAL T    L +     +    I+  IL    Y  + + N A+    + L K     +   L  IYN +GL YLN +DF  + EYF +  +L+  I    L
Sbjct:  122 LGEYYFNKKDYDEAFFNYNNSIDIFKNINQSETIPYLYLNIALCKAMLLQYTEALSFFYLSERYSIMYKDKLIEKRAKYNIAKCYIKLNKIDLALETIRKFLTLFSKEEDFEKYININILKANCYEVKKEFNTAIDIYDSLLSKN-INCNNPILGYIYNNLGLAYLNKDDFNNSLEYFDKAEQLRIRIDPDNL 313
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BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Match: A0A1G6QAC8_NIADE (Signal transduction histidine kinase n=1 Tax=Niabella drilacis (strain DSM 25811 / CCM 8410 / LMG 26954 / E90) TaxID=1285928 RepID=A0A1G6QAC8_NIADE)

HSP 1 Score: 58.2 bits (139), Expect = 9.080e-6
Identity = 44/180 (24.44%), Postives = 87/180 (48.33%), Query Frame = 0 
Query:   17 DTSLLIAKSALEHSLAIDNQKGILISHFSIGKASYHLSTMQEAAHHLNRSQALALELSDTTYLVLSKKWLGSILRYRSDYAGALEVYKEALTLAEIMNFDDEIPKITQNIAMIFLDQNQHDLAIEYYKKSIAKIKDLYTKSVCMTNL---GLAYLRSQQYDLALSTFMNSLDVCQMSNNV 193
            + S   A  ++  +  +  +KGI  +H   G+   + +    A      + A    +++   ++ + + +G++   +S++  AL  Y +AL +AE    +D I +I QNIA ++LDQ      ++Y KKS A   +       +T+L   GLAYL  +    A + F  +L++ + + N+
Sbjct:   59 EKSTQFANQSMAAAKTLGWKKGIAANHILSGELLLNGNKYDSALLQFKAAYATNTAINNIPGIISALQSIGNVYYGQSNHNQALPYYLKALEMAEKAEDNDRICRINQNIAGVYLDQENSTKMLQYAKKSYAAAINSKIPENTITSLESIGLAYLLGKDSISAGNYFSKALELNESTGNI 238
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BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Match: A0A084JB34_9CLOT (HTH cro/C1-type domain-containing protein n=1 Tax=Clostridium sulfidigenes TaxID=318464 RepID=A0A084JB34_9CLOT)

HSP 1 Score: 55.5 bits (132), Expect = 5.460e-5
Identity = 34/109 (31.19%), Postives = 54/109 (49.54%), Query Frame = 0 
Query:  159 CMTNLGLAYLRSQQYDLALSTFMNSLDVCQMSNNVSCEISPIILITQTYLYQDKNNEALSYGLATLEKRQAFVSKEDLVNIYNQIGLIYLNLEDFEPAHEYFIQCLELK 267
            C+ N+ L+Y +S +YD AL      L++C  ++N    IS IIL    YL +   + AL+     L      +    L  IYN IGLIY  L + + + ++F + +  K
Sbjct:  198 CLYNIALSYKKSSEYDNALIYIDELLNLCNTNHNFDLYISTIILKCNCYLNKKDYSIALTIYFDILNNFSENIGVH-LGMIYNNIGLIYCELNEIDKSIDFFSRSINFK 305
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BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Match: UPI001C10E2AB (tetratricopeptide repeat protein n=1 Tax=Tissierella carlieri TaxID=689904 RepID=UPI001C10E2AB)

HSP 1 Score: 55.1 bits (131), Expect = 7.440e-5
Identity = 56/219 (25.57%), Postives = 98/219 (44.75%), Query Frame = 0 
Query:   76 TTYLVLSKKWLGSILRYRSDYAGALEVYKEALTLAEIMNFDDE-IPKITQNIAMIFLDQNQHDLAIEYYKKSIAKIK----DLYTKSVCMTNLGLAYLRSQQYDLALSTFMNSLDVCQMSNNVSCEISPIILITQTYLYQDKNNEALSYGLATLEKRQAF-VSKEDLVNIYNQIGLIYLNLEDFEPAHEYFIQCLEL-KDHIPAQKLPYVYANLALSSE 287
            + YL+  K  LG+   YR  Y  A+ +++   TL  I N  ++ +  I  N A+ +     +  +++     +  I+    DL+ ++  +   GL YL   +Y+ ALS++ N+L V   +     +      I +TY   +  N A  Y  A LE       S      I NQ+ + Y NL +F+ A +Y+ + L+  K++I      Y+  NL    E
Sbjct:  168 SNYLLTIK--LGTNYIYRGKYQDAVSIFQN--TLINIDNIPEKYLIYIYYNYALAYFRLKMYSSSLKVISDLLRYIERKDYDLWRRTYNLQ--GLCYLEKGEYESALSSYNNALQVLTFTGYSDLKYLIYGNIAETYTKVNDENRAYKYVEAVLEDIDKLDKSSYSYSQICNQLAISYENLGEFKKAEKYYKESLKYAKENIQQD---YILKNLTALME 377
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79429.18646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5M9NP68_9VIBR3.720e-826.36GGDEF domain-containing protein n=6 Tax=Vibrio Tax... [more]
UPI001CF1F7107.250e-625.39tetratricopeptide repeat protein n=1 Tax=Clostridi... [more]
A0A1G6QAC8_NIADE9.080e-624.44Signal transduction histidine kinase n=1 Tax=Niabe... [more]
A0A084JB34_9CLOT5.460e-531.19HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
UPI001C10E2AB7.440e-525.57tetratricopeptide repeat protein n=1 Tax=Tissierel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 157..190
e-value: 10.0
score: 14.9
coord: 276..309
e-value: 410.0
score: 0.8
coord: 80..113
e-value: 68.0
score: 7.7
coord: 237..270
e-value: 0.094
score: 21.8
coord: 120..153
e-value: 0.078
score: 22.1
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 238..267
e-value: 2.8E-5
score: 24.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 157..190
score: 7.729
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 120..153
score: 6.874
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 80..113
score: 6.49
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 237..270
score: 9.706
NoneNo IPR availablePFAMPF13424TPR_12coord: 123..188
e-value: 1.1E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR46630FAMILY NOT NAMEDcoord: 122..265
coord: 16..111
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 16..151
e-value: 1.9E-16
score: 62.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 152..310
e-value: 5.8E-19
score: 70.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 160..296
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..184
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 80..270
score: 14.111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79429contigM-pyrifera_M_contig79429:13..942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79429.18646.1mRNA_M-pyrifera_M_contig79429.18646.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79429 13..942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79429.18646.1 ID=prot_M-pyrifera_M_contig79429.18646.1|Name=mRNA_M-pyrifera_M_contig79429.18646.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp
LDSLFLRFQDHVNSSPDTSLLIAKSALEHSLAIDNQKGILISHFSIGKAS
YHLSTMQEAAHHLNRSQALALELSDTTYLVLSKKWLGSILRYRSDYAGAL
EVYKEALTLAEIMNFDDEIPKITQNIAMIFLDQNQHDLAIEYYKKSIAKI
KDLYTKSVCMTNLGLAYLRSQQYDLALSTFMNSLDVCQMSNNVSCEISPI
ILITQTYLYQDKNNEALSYGLATLEKRQAFVSKEDLVNIYNQIGLIYLNL
EDFEPAHEYFIQCLELKDHIPAQKLPYVYANLALSSEGLGKNKDALGHVW
NFINLKDSLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom