prot_M-pyrifera_M_contig79313.18623.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig79313.18623.1
Unique Name	prot_M-pyrifera_M_contig79313.18623.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	112

Homology

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.850e-53
Identity = 90/111 (81.08%), Postives = 102/111 (91.89%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            YLS+VL+FA+VY  IS  +GC+L+L SIRE FLFSLETM+TVGYGT DYLF  CWIMLP+LSLQAC+GLLIDAFLIGILFARLSRPQTRA+TVVFTK+AVIRRVRGE+YFM
Sbjct:  170 YLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 280

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.730e-49
Identity = 88/111 (79.28%), Postives = 101/111 (90.99%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            YLS+V +FA+VY  IS  +GC+L+L SIRE FLFSLETM+TVGYGT DYLF  CW+MLP+LSLQAC+GLLIDAFLIGILFARLSRPQTRA+TVVFTK+AVIRRVRGE+YFM
Sbjct:  133 YLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 243

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.570e-38
Identity = 68/111 (61.26%), Postives = 87/111 (78.38%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            YL +V  FAL+Y++IS   GC++ +   REA+ FSLETM+TVGYGT D  F  CW ++ +++ QAC GLLIDA LIG+LFARL+RPQTRASTVVF+  AV+RR+RGE YFM
Sbjct:   57 YLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFM 167

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.210e-37
Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            YL++V +FA +Y+ I+   GC+L +   REA+ FSLETM+TVG+GT D  F  CW ++ +++ QAC GLLIDA LIG+LFARL RPQTRASTVVF+  AV+RR+RGE YFM
Sbjct:   82 YLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFM 192

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A482S2N8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2N8_9ARCH)

HSP 1 Score: 105 bits (261), Expect = 2.350e-25
Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y++ V  FA +Y  I  +  C L+  +   AF FSLETM+T+GY T D  F  C I+  VL+LQ C+ L++D   IGI++ RL+RP +RAST++F+K+AVIRR+RG+ YFM
Sbjct:   91 YVATVAFFATLYYAIRLNYVCELDFETWLGAFDFSLETMATIGYTTKDLSFANCAIVTVVLTLQCCIRLIVDGSTIGIIYCRLARPHSRASTIIFSKNAVIRRIRGKLYFM 201

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A484DZB3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZB3_BRELC)

HSP 1 Score: 102 bits (255), Expect = 1.470e-23
Identity = 51/114 (44.74%), Postives = 82/114 (71.93%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISA-HMGCHLELASIREAFLFSLETMSTVGYG--TSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y  ++L+FAL Y+ +S  H  CH+ L+SI +A++FSLET+ T+GYG  T+D  + GC  M  +L+L++  G+++D+  IGI +AR +R   RA+T++F+  AVIR++RG+ YFM
Sbjct:   99 YFFVILLFALAYLNVSMRHPTCHVGLSSIIDAYIFSLETIMTIGYGAPTNDIFYGGCTSMATLLTLESFAGIILDSVCIGIFYARFARANQRANTIIFSNSAVIRKIRGQYYFM 212

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.340e-23
Identity = 53/114 (46.49%), Postives = 80/114 (70.18%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISA-HMGCHLELASIREAFLFSLETMSTVGYG--TSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y  I+L FAL Y+ +S  H  CH+ L+SI EA++FSLET+ T+GYG  T+D  + GC  +  +L+L++  G+++D+  IGI +AR SR   RA+T++F+  AVIR++RG  YFM
Sbjct:   79 YFFIILFFALAYLDVSVRHPTCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFM 192

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: A0A833SV26_PHYIN (Inward rectifier potassium channel transmembrane domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SV26_PHYIN)

HSP 1 Score: 99.8 bits (247), Expect = 6.530e-23
Identity = 51/114 (44.74%), Postives = 79/114 (69.30%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISA-HMGCHLELASIREAFLFSLETMSTVGYG--TSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y  I+L FA+ Y+ +S  H  CH+ L+SI +A++FSLET+ T+GYG  T D  + GC  +  +L+L++  G+++D+  IGI +AR SR   RA+T++F+  AVIR++RG  YFM
Sbjct:   81 YFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFSGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHFYFM 194

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: D0N402_PHYIT (Animal inward rectifier K channel (IRK-C) family protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=D0N402_PHYIT)

HSP 1 Score: 99.8 bits (247), Expect = 1.550e-22
Identity = 51/114 (44.74%), Postives = 79/114 (69.30%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISA-HMGCHLELASIREAFLFSLETMSTVGYG--TSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y  I+L FA+ Y+ +S  H  CH+ L+SI +A++FSLET+ T+GYG  T D  + GC  +  +L+L++  G+++D+  IGI +AR SR   RA+T++F+  AVIR++RG  YFM
Sbjct:   71 YFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHFYFM 184

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BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Match: H3GJH8_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GJH8_PHYRM)

HSP 1 Score: 99.0 bits (245), Expect = 3.260e-22
Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = 0

Query:    1 YLSIVLIFALVYVMISA-HMGCHLELASIREAFLFSLETMSTVGYG--TSDYLFDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAVIRRVRGESYFM 111
            Y  I+  FAL Y+ +S  H  CH+ L+SI +A++FSLET+ T+GYG  T D  + GC  +  +L+L++  G+++D+  IGI +AR SR   RA+T++F+  AVIR++RG  YFM
Sbjct:   81 YFFIIFFFALAYLDVSVRHPTCHVGLSSIMDAYVFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFM 194

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig79313.18623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEB7_ECTSI	1.850e-53	81.08	IRK domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K8M2_9PHAE	3.730e-49	79.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CL18_9STRA	2.570e-38	61.26	Inward rectifier potassium channel-domain-containi...	[more]
A0A835YU47_9STRA	4.210e-37	59.46	Inward rectifier potassium channel-domain-containi...	[more]
A0A482S2N8_9ARCH	2.350e-25	48.65	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A484DZB3_BRELC	1.470e-23	44.74	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A421GNN7_9STRA	2.340e-23	46.49	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A833SV26_PHYIN	6.530e-23	44.74	Inward rectifier potassium channel transmembrane d...	[more]
D0N402_PHYIT	1.550e-22	44.74	Animal inward rectifier K channel (IRK-C) family p...	[more]
H3GJH8_PHYRM	3.260e-22	44.74	Uncharacterized protein n=18 Tax=Phytophthora TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040445	Potassium channel, inwardly rectifying, transmembrane domain	PFAM	PF01007	IRK	coord: 17..86 e-value: 9.0E-15 score: 54.7
None	No IPR available	GENE3D	1.10.287.70		coord: 1..85 e-value: 5.8E-30 score: 106.3
None	No IPR available	PANTHER	PTHR11767:SF103		coord: 1..111
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..81
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 82..111
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..17 score: 0.524
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 3..106
None	No IPR available	TMHMM	TMhelix		coord: 2..19
None	No IPR available	TMHMM	TMhelix		coord: 58..80
IPR013518	Potassium channel, inwardly rectifying, Kir, cytoplasmic	GENE3D	2.60.40.1400		coord: 86..111 e-value: 5.8E-30 score: 106.3
IPR016449	Potassium channel, inwardly rectifying, Kir	PANTHER	PTHR11767	INWARD RECTIFIER POTASSIUM CHANNEL	coord: 1..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig79313	contig	M-pyrifera_M_contig79313:282..617 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig79313.18623.1	mRNA_M-pyrifera_M_contig79313.18623.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig79313 282..617 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig79313.18623.1 ID=prot_M-pyrifera_M_contig79313.18623.1|Name=mRNA_M-pyrifera_M_contig79313.18623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
YLSIVLIFALVYVMISAHMGCHLELASIREAFLFSLETMSTVGYGTSDYL
FDGCWIMLPVLSLQACMGLLIDAFLIGILFARLSRPQTRASTVVFTKHAV
IRRVRGESYFM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040445	Kir_TM
IPR013518	K_chnl_inward-rec_Kir_cyto
IPR016449	K_chnl_inward-rec_Kir