prot_M-pyrifera_M_contig7930.18619.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7930.18619.1
Unique Nameprot_M-pyrifera_M_contig7930.18619.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length94
Homology
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BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A8C6WYF3_9GOBI (Tubulin alpha chain n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6WYF3_9GOBI)

HSP 1 Score: 56.2 bits (134), Expect = 3.830e-7
Identity = 36/53 (67.92%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:   37 SASPSTLARPASRPVTRAGSSTAWSTGSSPMARCPRTRPSVAVTMLSTLSSPR 89
            S SPST ARP  R VT AGS TAWS GSSPM RCP T+PS   T LST SS R
Sbjct:    8 SVSPSTWARPVCRSVTPAGSCTAWSMGSSPMDRCPVTKPSEEETTLSTPSSAR 60
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BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: UPI001155CECC (uncharacterized protein LOC115305219 n=2 Tax=Suricata suricatta TaxID=37032 RepID=UPI001155CECC)

HSP 1 Score: 50.8 bits (120), Expect = 3.090e-5
Identity = 37/59 (62.71%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:   35 CASASPSTLARPASRPVTRAGSSTAWSTGSSPMARCPRTRPSVAVTMLSTLSSPRPVSA 93
            CASASPSTLAR   R    AGSSTAW+T SSPMARC  TRP       ST SS R V A
Sbjct:  204 CASASPSTLARLVFRSAMPAGSSTAWNTASSPMARCQVTRPLGEEMTPSTPSSVRRVLA 262
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BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A060XZL2_ONCMY (Uncharacterized protein (Fragment) n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060XZL2_ONCMY)

HSP 1 Score: 50.1 bits (118), Expect = 6.090e-5
Identity = 32/56 (57.14%), Postives = 36/56 (64.29%), Query Frame = 0 
Query:   35 CASASPSTLARPASRPVTRAGSSTAWSTGSSPMARCPRTRPSVAVTMLSTLSSPRP 90
            C SAS STL RP  R    AG+ TAW+ GSSPM RCP T+PS      +TLSS RP
Sbjct: 1019 CVSASLSTLVRPVFRSGMPAGNCTAWNMGSSPMGRCPVTKPSAEGMTHATLSSARP 1074
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A8C6WYF3_9GOBI3.830e-767.92Tubulin alpha chain n=1 Tax=Neogobius melanostomus... [more]
UPI001155CECC3.090e-562.71uncharacterized protein LOC115305219 n=2 Tax=Suric... [more]
A0A060XZL2_ONCMY6.090e-557.14Uncharacterized protein (Fragment) n=1 Tax=Oncorhy... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7930contigM-pyrifera_M_contig7930:2915..3648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7930.18619.1mRNA_M-pyrifera_M_contig7930.18619.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7930 2915..3648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7930.18619.1 ID=prot_M-pyrifera_M_contig7930.18619.1|Name=mRNA_M-pyrifera_M_contig7930.18619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
PAVASRDDSPDNSPSSVSPQSSRHLSPFPAPITPCASASPSTLARPASRP
VTRAGSSTAWSTGSSPMARCPRTRPSVAVTMLSTLSSPRPVSA*
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