prot_M-pyrifera_M_contig79007.18559.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79007.18559.1
Unique Nameprot_M-pyrifera_M_contig79007.18559.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Match: A0A8D9FGU2_9HEMI (Zinc finger protein 614 n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9FGU2_9HEMI)

HSP 1 Score: 63.2 bits (152), Expect = 2.430e-9
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:    1 CLECDYKAQTRHGLQIHVARKHRRKISLLCCGDCGKSFKSSSGLRRHKRSYHEGVRYSCSRCPKSFTYQSALRLH 75
            C  C   A+     Q+ +       +    CG CGK+FK  + +  H++++HEGVRY C++CPK F  QS L +H
Sbjct:  383 CFMCSKCAKPFSETQLLMEHVRECTVVGYTCGTCGKNFKFKNSMVTHRKTFHEGVRYKCTKCPKIFMAQSKLNIH 457          
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Match: A0A8D8WTS2_9HEMI (Transcription factor hamlet (Fragment) n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8WTS2_9HEMI)

HSP 1 Score: 52.0 bits (123), Expect = 8.440e-6
Identity = 22/53 (41.51%), Postives = 30/53 (56.60%), Query Frame = 0
Query:   27 SLLCCGDCGKSFKSSSGLRRHKRSYHEGVRYSCSRCPKSFTYQSALRLHEQTH 79
            S+  C  C K+F     L  H RS+HEG+R+ C  C K+F+ +  LR H  TH
Sbjct:   86 SVYTCTQCPKTFLKKRNLNTHLRSFHEGIRHPCEICSKTFSCKGGLRKHLHTH 138          
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Match: A0A8D9EXC3_9HEMI (Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9EXC3_9HEMI)

HSP 1 Score: 49.7 bits (117), Expect = 3.860e-5
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0
Query:   34 CGKSFKSSSGLRRHKRSYHEGVRYSCSRCPKSFTYQSALRLH 75
            C KSF     L +H RS HEG++Y CS+C KSF  +S LR H
Sbjct:    2 CPKSFSRKGELNKHVRSTHEGIKYPCSKCSKSFLDRSNLRRH 43          
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Match: UPI001EB047B9 (uncharacterized protein LOC124142196 n=7 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB047B9)

HSP 1 Score: 50.4 bits (119), Expect = 7.130e-5
Identity = 21/46 (45.65%), Postives = 24/46 (52.17%), Query Frame = 0
Query:   31 CGDCGKSFKSSSGLRRHKRSYHEGVRYSCSRCPKSFTYQSALRLHE 76
            C  CGK F     L RH RS H+G RY+C  C KSF     L  H+
Sbjct:   45 CPQCGKGFNRKDNLSRHMRSVHQGERYACDHCTKSFASNQKLNKHK 90          
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Match: A0A7M7JX21_VARDE (Uncharacterized protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7JX21_VARDE)

HSP 1 Score: 50.4 bits (119), Expect = 7.190e-5
Identity = 27/81 (33.33%), Postives = 36/81 (44.44%), Query Frame = 0
Query:    1 CLECDYKAQTRHGLQIHVARKHRRKISLLCCGDCGKSFKSSSGLRRHKRSYHEGVRYSCSR--CPKSFTYQSALRLHEQTH 79
            C  C+Y A+ R  L +HV   H  K+  + C  C K F     L  HK + H G  + C    C +SF  +  LR H   H
Sbjct: 1926 CDHCEYVAEKRRQLVLHVKNVHADKM--IACDACDKRFAFKISLWNHKNAMHLGAEHKCPHPHCTRSFKDEDKLRTHLFVH 2004          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79007.18559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A8D9FGU2_9HEMI2.430e-936.00Zinc finger protein 614 n=6 Tax=Cacopsylla melanon... [more]
A0A8D8WTS2_9HEMI8.440e-641.51Transcription factor hamlet (Fragment) n=6 Tax=Cac... [more]
A0A8D9EXC3_9HEMI3.860e-552.38Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsyll... [more]
UPI001EB047B97.130e-545.65uncharacterized protein LOC124142196 n=7 Tax=Halio... [more]
A0A7M7JX21_VARDE7.190e-533.33Uncharacterized protein n=2 Tax=Varroa TaxID=62624... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 57..79
e-value: 0.0046
score: 26.2
coord: 29..52
e-value: 0.014
score: 24.6
coord: 1..22
e-value: 34.0
score: 8.6
coord: 84..107
e-value: 0.0018
score: 27.6
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 84..107
e-value: 3.9E-6
score: 27.0
coord: 31..52
e-value: 3.1E-6
score: 27.3
coord: 57..79
e-value: 3.5E-5
score: 24.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 59..79
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 30..52
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 86..107
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 84..107
score: 12.466
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 57..84
score: 13.048
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 29..57
score: 12.715
NoneNo IPR availableGENE3D3.30.160.60coord: 56..82
e-value: 3.6E-7
score: 31.9
NoneNo IPR availableGENE3D3.30.160.60coord: 1..55
e-value: 2.9E-9
score: 38.9
NoneNo IPR availableGENE3D3.30.160.60coord: 83..107
e-value: 1.0E-6
score: 30.6
NoneNo IPR availablePANTHERPTHR24409:SF362SI:CH73-299H12.4-RELATEDcoord: 1..104
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 1..104
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 65..107
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 30..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79007contigM-pyrifera_M_contig79007:558..956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79007.18559.1mRNA_M-pyrifera_M_contig79007.18559.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79007 558..956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79007.18559.1 ID=prot_M-pyrifera_M_contig79007.18559.1|Name=mRNA_M-pyrifera_M_contig79007.18559.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
CLECDYKAQTRHGLQIHVARKHRRKISLLCCGDCGKSFKSSSGLRRHKRS
YHEGVRYSCSRCPKSFTYQSALRLHEQTHDGVRHVCEECGKSYSYRSNLL
SHIKSSH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf