prot_M-pyrifera_M_contig78925.18544.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78925.18544.1
Unique Nameprot_M-pyrifera_M_contig78925.18544.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length299
Homology
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BLAST of mRNA_M-pyrifera_M_contig78925.18544.1 vs. uniprot
Match: A0A7C3QAR4_9BACT (TlpA family protein disulfide reductase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3QAR4_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 9.530e-7
Identity = 57/228 (25.00%), Postives = 98/228 (42.98%), Query Frame = 0 
Query:   22 LLDASRKAISEMTGFAAQVKKFGDGDKTIKAMMPSMEG----QMIFGEHPEYGMSLRMTGKSRDKQDAAPN--SMDM---LRSNSAIVWLDYTERTIDEHPADTRIRTVPTSVKLMMFDSLLDEDPYGDRMDQAESIELEERKEVNGELCHVVRVNYAKSKAGGRSTSFGNTHNAARWFISVEDMLPRRIEYVTTGMMRFQLVTELSNFELS---DPSPEQIDVMRLP 237
            LL  S +AI      +   K +  G   ++++ P  +G    + + G  P+  ++ R+TG++  K   A +  S+D       N  I W D   + I E    +    +    K +  D L    PY   +    +  L+ RK + G  C VV++              G   N  RW++ VED LPRR++ V  G M  +++ E S+ ++    DPS   +  +R+P
Sbjct:   60 LLRRSAEAIRAARAMSYSAKAYSTG--ALESLTPKADGLVKMRRVAGGAPDAWLA-RITGRTTKKGGKAGDGESLDFDVAYLGNKRIEWADAKVQKIYEKVDRSAQSPIVQGAKSLRIDELFAVAPYTRDLTAGTATVLD-RKTIAGVECEVVQI------------EMGERKNKTRWYLGVEDHLPRRVDRVIEGAMASEVIVEASDLKVETSEDPSITPVS-LRIP 270
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78925.18544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C3QAR4_9BACT9.530e-725.00TlpA family protein disulfide reductase n=1 Tax=Ph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78925contigM-pyrifera_M_contig78925:1..897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78925.18544.1mRNA_M-pyrifera_M_contig78925.18544.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78925 1..897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78925.18544.1 ID=prot_M-pyrifera_M_contig78925.18544.1|Name=mRNA_M-pyrifera_M_contig78925.18544.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp
MVCFVLGLGSPAMAQGEDPNELLDASRKAISEMTGFAAQVKKFGDGDKTI
KAMMPSMEGQMIFGEHPEYGMSLRMTGKSRDKQDAAPNSMDMLRSNSAIV
WLDYTERTIDEHPADTRIRTVPTSVKLMMFDSLLDEDPYGDRMDQAESIE
LEERKEVNGELCHVVRVNYAKSKAGGRSTSFGNTHNAARWFISVEDMLPR
RIEYVTTGMMRFQLVTELSNFELSDPSPEQIDVMRLPGFELKSTLNQSAP
EEVKAPSKSTQTSAPTAPAKTTSRSPRAPAFEFTNDAGATINNASQRGR
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