prot_M-pyrifera_M_contig78914.18535.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78914.18535.1
Unique Nameprot_M-pyrifera_M_contig78914.18535.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
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BLAST of mRNA_M-pyrifera_M_contig78914.18535.1 vs. uniprot
Match: A0A3M1FZV2_9CHLR (Uncharacterized protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FZV2_9CHLR)

HSP 1 Score: 58.5 bits (140), Expect = 1.820e-7
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 0 
Query:   11 PGGRXXXXXXMKAGMD---AAAETLGLSAEDLKSALDEGSTLEELATSAGVSTDDLEAAMAA-AIEDVAPAQAAERMTAD-----LGSIISGERPXXXXXXXGGPGQTDVQSAVEKLAEALDTSTEDLFASIEAG 136
            PGG        + G D   A AE LG++AE+L++AL+EG TLEE+AT  GV   DL+A M   A E +A A A  ++T +     L  I +GERP       G PGQ       E LAEAL  ++E+L  ++ +G
Sbjct:   50 PGGGHGFGKGFRGGEDHLQAMAEALGMTAEELQAALEEGQTLEEIATEQGV---DLQAVMLEQAQEKLAQAVADGKLTQEEADQILERIQNGERPGPFGPRRGHPGQ-------EALAEALGMTSEELHEALRSG 174
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BLAST of mRNA_M-pyrifera_M_contig78914.18535.1 vs. uniprot
Match: A0A853CP12_9ACTN (Uncharacterized protein n=1 Tax=Geodermatophilus daqingensis TaxID=2026353 RepID=A0A853CP12_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 1.290e-5
Identity = 48/138 (34.78%), Postives = 67/138 (48.55%), Query Frame = 0 
Query:    7 AGGPPGGRXXXXXXMKAGMDAAAETLGLSAEDLKSALDEGSTLEELATSAGVSTDDLEAAMAAAIEDVAPAQAAERMTADLGSIISGERPXXXXXXXGGPGQTDVQSAVEKLAEALDTSTEDLFASIEAGT-LADLFE 143
            AG PPGG           + A AE LG+S  DL+SAL  GST+ +LAT+AGVS DDL   +A+ +       A    TA    I  G RP           + D+   ++ L+ AL  S+ DL   +  G+ + DL +
Sbjct:   15 AGPPPGGAHAKT------LKAVAEKLGMSTGDLRSALKSGSTMADLATTAGVSRDDLVQTIASTLPATGRDGATVDTTAMATDIADGVRPQRPSQSS----EPDLGKGLDALSSALGISSSDLLDRLTEGSGITDLLQ 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78914.18535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A3M1FZV2_9CHLR1.820e-740.00Uncharacterized protein n=1 Tax=Caldilineae bacter... [more]
A0A853CP12_9ACTN1.290e-534.78Uncharacterized protein n=1 Tax=Geodermatophilus d... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78914contigM-pyrifera_M_contig78914:242..673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78914.18535.1mRNA_M-pyrifera_M_contig78914.18535.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78914 242..673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78914.18535.1 ID=prot_M-pyrifera_M_contig78914.18535.1|Name=mRNA_M-pyrifera_M_contig78914.18535.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
MSQVQGAGGPPGGRPPGGGPMKAGMDAAAETLGLSAEDLKSALDEGSTLE
ELATSAGVSTDDLEAAMAAAIEDVAPAQAAERMTADLGSIISGERPPPPP
RSGGGPGQTDVQSAVEKLAEALDTSTEDLFASIEAGTLADLFET
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