prot_M-pyrifera_M_contig78649.18483.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78649.18483.1
Unique Nameprot_M-pyrifera_M_contig78649.18483.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length226
Homology
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A7V8V8T7_9BACT (Uncharacterized protein n=2 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V8T7_9BACT)

HSP 1 Score: 464 bits (1193), Expect = 8.550e-158
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0
Query:    1 DFRSNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTSSNIDFHGEDIDPETLDQFSEQDWDDCVPNWPL 225
            DFRSNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVT+SNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTSSNIDFHGEDIDPETL QFSEQDWDDCVPNWPL
Sbjct:  526 DFRSNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTLSNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTSSNIDFHGEDIDPETLYQFSEQDWDDCVPNWPL 750          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A7V4LG25_9DELT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LG25_9DELT)

HSP 1 Score: 245 bits (625), Expect = 1.660e-75
Identity = 117/223 (52.47%), Postives = 148/223 (66.37%), Query Frame = 0
Query:    4 SNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASC-RTLTANAPIVVSPTSSNIDFHGEDIDPETLDQFSEQDWDDCVPNWPL 225
            S V + D+ FAYNG H    +W+DGLTVHD   S F GN FIDNTDID IFGG +   + NNTV+HT D  GGAFA+IMIHKWP+TSG Y    +  NSVD GP +  G+GLYIASEGWY ETP+G  +   T   I  N V+N +N +Y+AA   AIY N F N+HGVS P SC R++ +  PIVVSPT+++  F+ E++DP     +S   W  C+PN+P 
Sbjct:  270 SGVAIRDSTFAYNGRHTTPNMWSDGLTVHDPSRSDFSGNTFIDNTDIDLIFGGCRACTVRNNTVLHTDDPAGGAFAAIMIHKWPSTSGCYEDVDVSGNSVDCGPRRACGSGLYIASEGWYPETPYGTLVDGTTSGLITRNAVVNAMNALYIAARGLAIYGNDFLNAHGVSIPNSCHRSIVSVTPIVVSPTTASCHFNYENVDPVMSVHYSSASWAGCIPNYPF 492          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A7X9P942_9DELT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9P942_9DELT)

HSP 1 Score: 243 bits (621), Expect = 8.890e-75
Identity = 120/221 (54.30%), Postives = 146/221 (66.06%), Query Frame = 0
Query:    6 VRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASC-RTLTANAPIVVSPTSSNIDFHGEDIDPETLDQFSEQDWDDCVPNWPL 225
            V + D+ FAYNG H    LW+DGLTVHD   S F GN FIDNTDID IFGG +   I NNTV HT D  GGAFA+IMIHKWPTTSG Y    +  NSVD GP +  G+GLYIASEGWY ETP+G  +   T   I  N V+N +N +Y+AA   AIY N F N+HGVS P SC R++ +  PIVVSPT+++  F+ E+IDP     +S   W  C+PN+P 
Sbjct:  284 VAIRDSTFAYNGRHTVRNLWSDGLTVHDPSRSDFSGNTFIDNTDIDLIFGGCRACTIRNNTVRHTDDPAGGAFAAIMIHKWPTTSGCYEDVDVSGNSVDCGPLRACGSGLYIASEGWYPETPYGTLVDGTTSGLITRNAVVNAMNALYIAARGLAIYGNDFLNAHGVSIPNSCHRSIVSVTPIVVSPTTASCHFNYENIDPVMSVHYSSASWAGCIPNYPF 504          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A1V5XBM4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5XBM4_9DELT)

HSP 1 Score: 214 bits (546), Expect = 1.630e-63
Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 0
Query:    5 NVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVAAHDFAIYDNTFTNSHGVSFPASC-RTLTANAPIVVSPTSSNIDFHGEDIDPETLDQFSEQDWDDCVPNWPL 225
            NV +  N FA+NG+H    +W+DGLTVHD+    +  N FIDNTDID IFGG +   I  N V HT+D  GGAFA+IMI KWPTTSG Y    I  N+VD GP +  G+  YI SE WY ETP+G   +  T   I  N+V   +N  Y+AA   AIY N F  +HGV  P SC + + +  PIVVSPT+++  F+ E++DP     +S   W  CVPN+P 
Sbjct:  293 NVTISHNTFAFNGLHTTKNMWSDGLTVHDSEKGVYEHNTFIDNTDIDLIFGGCKKCKIRYNQVHHTSDPAGGAFAAIMIQKWPTTSGCYEDVDISGNAVDCGPLRACGSAFYIGSESWYPETPYGTLQNGTTSGLIKGNSVNRAMNAFYIAARGLAIYGNDFLQAHGVPIPNSCHKNIVSTTPIVVSPTAASCHFNFENVDPGMSIHYSSASWAGCVPNYPF 514          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A3M1CQX0_9DELT (N_BRCA1_IG domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1CQX0_9DELT)

HSP 1 Score: 164 bits (416), Expect = 2.510e-43
Identity = 90/222 (40.54%), Postives = 127/222 (57.21%), Query Frame = 0
Query:    3 RSNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVA-AHDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTSSNIDFHGEDIDPETLDQFSEQDWDDCVPNW 223
            R+ V V ++     GVH++  LW+DG+TVHDA +S+F GN   DNTDID IFGG +N  I  NT++H    +  +FA++MIH WPTTSGNY GT++ +N++D G  K  G GLYI  + WYD   FG          ++ NTV N   G+ +  AHD  +YDN  + + G++  ASC   T      +   S NID   + I       + + D+D C+PNW
Sbjct:  540 RARVVVSNSTVVGCGVHDREGLWSDGITVHDATDSRFTGNYLADNTDIDLIFGGCRNCDISGNTILHGHAFSSSSFAALMIHAWPTTSGNYQGTVVHDNTIDCGAQKQCGIGLYIGPDAWYDADTFG--------GSVHGNTVKNAQFGLLIDDAHDVEVYDNPVSGTKGLT-KASCGWKTT-YDYGIGRDSFNIDTSSDSIGAV----YHQVDFDRCIPNW 747          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A4P6XC58_9SPHN (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Sphingomonas sp. AAP5 TaxID=1523415 RepID=A0A4P6XC58_9SPHN)

HSP 1 Score: 119 bits (297), Expect = 5.380e-28
Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 0
Query:    6 VRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYV--AAHDFAIYDNTFTNSHGVSFPASCRT 180
            +RV D++F  NG H    +WADGLTVH+A ++    NLF DNTD+  IFGG     I +N+  H+    G +FA +M+  WPTTSG++SG++I  N+++  P K  G G+ I S  WY            T  E+  NTV   + G+ V        I DNT   S G  + ++C T
Sbjct:  196 LRVIDSLFWENGDHQTPLMWADGLTVHEAKDATITRNLFRDNTDVQLIFGGCARCRISHNSFTHSEGFGGASFAELMLQSWPTTSGDFSGSLISENAINCSPTKRCGYGIMIGSSPWY--------AGRATGGEVSRNTVRFAMIGLNVDRLTGPMVIRDNTIAESGG-RYSSACGT 363          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A196MK04_9SPHN (Beta_helix domain-containing protein n=2 Tax=Sphingobium sp. TCM1 TaxID=453246 RepID=A0A196MK04_9SPHN)

HSP 1 Score: 116 bits (291), Expect = 8.060e-28
Identity = 69/197 (35.03%), Postives = 101/197 (51.27%), Query Frame = 0
Query:    6 VRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWP-TTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNG-MYVAAHDFAIYDNTFTNSHGVSFPASCRT--LTANAPIVVSPTSSNIDF 198
            V + DN+F+ NG HN    WADGLT+H A      GN FIDN+D+  IFG   +  I +N   H+    GG+FA +M+H WP +TSG+++GT +  N +D G  +  G G+ I S+ WYD   FG T+S            I+T+ G M V  +D  +    + +  GV      R     A+ P V    + ++ F
Sbjct:   97 VVIRDNLFSRNGRHNVQSHWADGLTIHTARRFAVTGNRFIDNSDVQLIFGSCVDCTISDNRFDHSGSAEGGSFAELMLHAWPGSTSGDFTGTRVTRNRIDCGQQQRCGFGIMIGSKPWYDAPAFGGTVSGNRVRGAMIALNIDTLTGPMTVEDNDLNLSSGRYPSMCGVQDVRGIRANISPASRPFVAGMPARDLSF 293          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: A0A653J7A1_9SPHN (Beta_helix domain-containing protein n=1 Tax=Novosphingobium sp. 9U TaxID=2653158 RepID=A0A653J7A1_9SPHN)

HSP 1 Score: 115 bits (289), Expect = 6.820e-27
Identity = 51/128 (39.84%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    6 VRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMS 133
            + V D++   NG H+   +WADG+TVHDA ++    N F+DNTD+  IFGG    +++NN+  H++     +FA +M+H W  TSGN+SG++   N +D G ++  G G+ I  E WY    FG T+S
Sbjct:  189 LSVTDSLIGPNGQHDTLMMWADGITVHDAASAVIQNNTFLDNTDVQLIFGGCTECIVKNNSFRHSSSFKRASFAELMLHAWSNTSGNFSGSVTSQNKIDCGRSRRCGYGIMIGGEPWYPAKTFGGTVS 316          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: UPI001F5A4C1B (hypothetical protein n=1 Tax=Sphingomonas sp. BAUL-RG-20F-R05-02 TaxID=2914830 RepID=UPI001F5A4C1B)

HSP 1 Score: 113 bits (282), Expect = 6.130e-26
Identity = 63/192 (32.81%), Postives = 99/192 (51.56%), Query Frame = 0
Query:    5 NVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWP-TTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVNGMYVAA--HDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTS 193
            N  +  N  A NG H    +W+DGLTVHDA +   V N FIDNTD+  IFGG  + ++ NN   H   + GG++A +M+  WP +TSG Y GT + NN ++ GP +  G GL + S  WYD    G  +S         N ++N V  + +     +  + +N+ + +      ++C  L  ++ + V+  S
Sbjct:  175 NGHIFGNTIAGNGTHTVHLMWSDGLTVHDAQHLAVVHNHFIDNTDVQLIFGGCTHCIVANNIFRHGGVSAGGSYAELMVQAWPKSTSGRYDGTKVVNNDINCGPQRDCGFGLMLGSTPWYDAPTSGGVVSG--------NRIVNAVLPIDIEGLTGEMTVTNNSISGAPAGRVRSTCGLLNVSSQVNVAAAS 358          
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Match: F6IC46_9SPHN (Beta_helix domain-containing protein n=2 Tax=Novosphingobium sp. PP1Y TaxID=702113 RepID=F6IC46_9SPHN)

HSP 1 Score: 110 bits (276), Expect = 4.640e-25
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 0
Query:   16 NGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDIDFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRNNSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSN 134
            NG H+   +WADG+T+HD+  +    N F+DNTD+  +FGG +N ++E NT  H+A     +FA +M+H WP TSG+++G+II  N++D    +  G G+ I  E WY    FG  +SN
Sbjct:  195 NGTHDVHQMWADGVTIHDSSGAYVKNNEFLDNTDVQLVFGGCRNCIVEGNTFHHSAAFAHASFAELMLHAWPNTSGDFTGSIISLNNIDCNKARRCGYGIMIGGEPWYPARTFGGIVSN 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78649.18483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A7V8V8T7_9BACT8.550e-15899.11Uncharacterized protein n=2 Tax=Bremerella alba Ta... [more]
A0A7V4LG25_9DELT1.660e-7552.47Right-handed parallel beta-helix repeat-containing... [more]
A0A7X9P942_9DELT8.890e-7554.30Right-handed parallel beta-helix repeat-containing... [more]
A0A1V5XBM4_9DELT1.630e-6347.30Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A3M1CQX0_9DELT2.510e-4340.54N_BRCA1_IG domain-containing protein n=1 Tax=Delta... [more]
A0A4P6XC58_9SPHN5.380e-2837.85Right-handed parallel beta-helix repeat-containing... [more]
A0A196MK04_9SPHN8.060e-2835.03Beta_helix domain-containing protein n=2 Tax=Sphin... [more]
A0A653J7A1_9SPHN6.820e-2739.84Beta_helix domain-containing protein n=1 Tax=Novos... [more]
UPI001F5A4C1B6.130e-2632.81hypothetical protein n=1 Tax=Sphingomonas sp. BAUL... [more]
F6IC46_9SPHN4.640e-2541.18Beta_helix domain-containing protein n=2 Tax=Novos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 57..85
e-value: 580.0
score: 8.9
coord: 93..119
e-value: 3000.0
score: 3.9
coord: 135..156
e-value: 770.0
score: 8.0
coord: 3..33
e-value: 1200.0
score: 6.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..203
e-value: 1.6E-9
score: 39.3
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78649contigM-pyrifera_M_contig78649:26..703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78649.18483.1mRNA_M-pyrifera_M_contig78649.18483.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78649 26..703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78649.18483.1 ID=prot_M-pyrifera_M_contig78649.18483.1|Name=mRNA_M-pyrifera_M_contig78649.18483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
DFRSNVRVDDNIFAYNGVHNQSFLWADGLTVHDAYNSQFVGNLFIDNTDI
DFIFGGAQNSLIENNTVIHTADTTGGAFASIMIHKWPTTSGNYSGTIIRN
NSVDGGPNKTAGTGLYIASEGWYDETPFGVTMSNPTQAEIYNNTVINTVN
GMYVAAHDFAIYDNTFTNSHGVSFPASCRTLTANAPIVVSPTSSNIDFHG
EDIDPETLDQFSEQDWDDCVPNWPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence