prot_M-pyrifera_M_contig78628.18477.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78628.18477.1
Unique Nameprot_M-pyrifera_M_contig78628.18477.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: D8LNY9_ECTSI (DNA repair helicase rad5,16, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY9_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 3.900e-24
Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNL 57
            MLDLAE S+ARGGWTFRRLDGAMSQQ+RES+LK F TD SV+V+LVSLKAGGVGLNL
Sbjct:   19 MLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNL 75          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.200e-22
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            MLDLAE S+ARGGWTFRRLDGAMSQQ+RES+LK F TD SV+V+LVSLKAGGVGLNLTA
Sbjct: 1475 MLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNLTA 1533          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A6V1XFX6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XFX6_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 1.530e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLT 58
            MLDL E  + R GW   RLDG+MSQQ+RE +L+ F T+  + V+L+SLKAGGVGLNLT
Sbjct:   52 MLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 109          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A2X0P839_9BASI (BQ5605_C008g05254 protein n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0P839_9BASI)

HSP 1 Score: 68.9 bits (167), Expect = 3.350e-12
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    2 LDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            LDL E  MARGG+T+ RLDGAMSQQ RE ++  F T     +LL SLKAGGVGLNL A
Sbjct: 1126 LDLIERVMARGGFTYLRLDGAMSQQAREKAVHKFTTTTKSCILLASLKAGGVGLNLIA 1183          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A0L0H763_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H763_SPIPD)

HSP 1 Score: 68.2 bits (165), Expect = 6.260e-12
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLT 58
            MLDL E S+   G+ F RLDG MS+Q R  +++SF TD SV+V+LVSLKAGGVGLNLT
Sbjct: 1115 MLDLLEPSLRTYGFGFVRLDGKMSRQDRTDAMESFKTDPSVTVMLVSLKAGGVGLNLT 1172          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: SM3L2_ARATH (DNA repair protein RAD5A n=19 Tax=Brassicaceae TaxID=3700 RepID=SM3L2_ARATH)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    2 LDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            LDL +  ++R  ++F RLDG +SQQ+RE  LK F  D S+ VLL+SLKAGGVG+NLTA
Sbjct:  892 LDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTA 949          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: UPI0012630830 (DNA repair protein RAD5A isoform X1 n=3 Tax=Pistacia vera TaxID=55513 RepID=UPI0012630830)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    2 LDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            LDL +  ++R   TF RLDG ++QQRRE  LK F  D +V VLL+SLKAGGVG+NLTA
Sbjct:  896 LDLLQIPLSRNNITFLRLDGTLTQQRREKVLKQFSEDTNVLVLLMSLKAGGVGINLTA 953          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A0K9RQK1_SPIOL (Uncharacterized protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RQK1_SPIOL)

HSP 1 Score: 65.9 bits (159), Expect = 4.070e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    2 LDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            LDL E  + R   +F RLDG +SQQ+RE  LK F  D+ V VLL+SLKAGGVG+NLTA
Sbjct:  893 LDLLEIPLTRNNISFLRLDGTLSQQQRERVLKKFSEDSDVMVLLMSLKAGGVGINLTA 950          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A484N638_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484N638_9ASTE)

HSP 1 Score: 65.9 bits (159), Expect = 4.070e-11
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    2 LDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLTA 59
            LDL + +++R G +F RLDG ++QQ RE  +K+F  + SV VLL+SLKAGGVGLNLTA
Sbjct:  916 LDLLQIALSRNGISFLRLDGTLNQQHREKVIKTFSEEHSVLVLLMSLKAGGVGLNLTA 973          
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Match: A0A6B2LL46_9EUKA (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LL46_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 7.210e-11
Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKAGGVGLNLT 58
            MLDL E  +   G  F RLDG+M+Q  R+++++SF+TD ++ + LVS+KAGG+GLNLT
Sbjct:   38 MLDLLEKPLKARGHQFVRLDGSMAQNHRQTAIESFNTDPNIKIFLVSMKAGGLGLNLT 95          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78628.18477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNY9_ECTSI3.900e-2484.21DNA repair helicase rad5,16, putative (Partial) (F... [more]
A0A6H5KHD4_9PHAE3.200e-2284.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1XFX6_HETAK1.530e-1360.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2X0P839_9BASI3.350e-1263.79BQ5605_C008g05254 protein n=3 Tax=Microbotryum Tax... [more]
A0A0L0H763_SPIPD6.260e-1263.79Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
SM3L2_ARATH1.590e-1158.62DNA repair protein RAD5A n=19 Tax=Brassicaceae Tax... [more]
UPI00126308301.590e-1160.34DNA repair protein RAD5A isoform X1 n=3 Tax=Pistac... [more]
A0A0K9RQK1_SPIOL4.070e-1160.34Uncharacterized protein n=3 Tax=Chenopodioideae Ta... [more]
A0A484N638_9ASTE4.070e-1158.62Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A6B2LL46_9EUKA7.210e-1151.72Helicase C-terminal domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..59
e-value: 3.8E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 2..59
NoneNo IPR availablePANTHERPTHR45626:SF1ATP-DEPENDENT HELICASE ULS1coord: 2..59
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78628contigM-pyrifera_M_contig78628:179..820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78628.18477.1mRNA_M-pyrifera_M_contig78628.18477.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78628 161..820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78628.18477.1 ID=prot_M-pyrifera_M_contig78628.18477.1|Name=mRNA_M-pyrifera_M_contig78628.18477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
MLDLAETSMARGGWTFRRLDGAMSQQRRESSLKSFDTDASVSVLLVSLKA
GGVGLNLTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase