prot_M-pyrifera_M_contig78595.18465.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78595.18465.1
Unique Nameprot_M-pyrifera_M_contig78595.18465.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A2E9XVF3_9RICK (Uncharacterized protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E9XVF3_9RICK)

HSP 1 Score: 221 bits (563), Expect = 3.730e-71
Identity = 109/162 (67.28%), Postives = 132/162 (81.48%), Query Frame = 0
Query:    1 FLSKTKFKLKLNQFF-------VYKDNFVLIHKNYIRTFFSLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKSRLGSGFGYYG 155
            +L  +KFKLK N+ F             +L+HK YIR FF+L W +L+G SHGYKT LYVKGKGLRLQLKTRK  L IYLKLGYSHKIFL LP+ CWAK+FGRRR+++LY+LNYI+LRNLVLKIRSFYP+GLYK RGFY+E+++I+I+EGKSRL +GFGYYG
Sbjct:   31 YLINSKFKLKSNKVFSLNPLDSATNTTIILVHKRYIRVFFTLVWMHLEGSSHGYKTILYVKGKGLRLQLKTRKGHLCIYLKLGYSHKIFLHLPEFCWAKLFGRRRTMKLYALNYIVLRNLVLKIRSFYPLGLYKVRGFYVENDDIRIIEGKSRL-TGFGYYG 191          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A7X8EIA5_9BACT (50S ribosomal protein L6 n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X8EIA5_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 6.060e-9
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0
Query:   34 SLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRS---IRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKSRLGS 149
            SL  + + GVS GY  TL + G G R +     N  ++ L LGYSH IF++LPK    +    RRS   I L S++  L+ ++  KIRS      YK +G   E+E ++   GKS + S
Sbjct:   71 SLVKNMVVGVSEGYNITLELVGVGFRAEA----NGQMLELNLGYSHSIFIELPKEISVEAKSDRRSNPKITLSSIDKQLIGHVAAKIRSLRKPEPYKGKGIRYENEIVRRKAGKSAVKS 185          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: I4ALV2_BERLS (50S ribosomal protein L6 n=2 Tax=Cytophagales TaxID=768507 RepID=I4ALV2_BERLS)

HSP 1 Score: 60.8 bits (146), Expect = 1.570e-8
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0
Query:   34 SLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAK---IFGRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKS 145
            SL  + ++GVS+GYKT L + G G + + K +    ++ L LGYSH IFL +PK        + G+   + L S +  LL ++  KIRS   V  YK +G     E ++   GKS
Sbjct:   70 SLVQNMVEGVSNGYKTHLELVGVGYKAEAKGQ----ILELNLGYSHAIFLQVPKEIAVSAEMLKGQNPKVTLESSDKELLGHITAKIRSLRKVEPYKGKGVRFVGEQVRRKAGKS 180          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A7T5BN29_9STRA (Ribosomal protein L6 n=1 Tax=Odontella regia TaxID=1335017 RepID=A0A7T5BN29_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-8
Identity = 46/149 (30.87%), Postives = 67/149 (44.97%), Query Frame = 0
Query:    3 SKTKFKLKLNQFFVYKDNFVLIHKN-------YIRTFFSLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGK 144
            +K  F +  N   +   NF L  KN       Y+    S+    +  VS+     L   G G ++ + +  NK+++ LK+G+SH +FL LP N     F     I L+  NY  L  +   IR       YK +G   E ENIK+ EGK
Sbjct:   40 NKLNFSISSNYIKITPYNFYLPSKNVKKKTKSYLGLICSIIKQSVLEVSNILCKKLKFVGVGFKVFIHSIFNKIILQLKIGFSHTVFLKLPNNIKVHCFKSNSKIYLFGTNYRKLLQITSFIRKLKIPEPYKGKGILYELENIKLKEGK 188          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A1F3M3X5_9BACT (50S ribosomal protein L6 n=5 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A1F3M3X5_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 8.480e-7
Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = 0
Query:    3 SKTKFKLKLNQFFVYKDNFVLIHKNYIRTFFSLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIF---GRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKS 145
            S    K+K  Q  +++ +  L HK     + SL  + + GVS GYK    + G G + + K +    ++ L LG+SH IF++LPK    +     G+   I+L S++  LL  +  KIRS      YK +G   + E ++   GK+
Sbjct:   40 SAITLKVKDGQIELHRISEELDHKAKHGLYRSLIHNMVIGVSEGYKLVQELVGVGYKAEAKGQ----ILELSLGFSHHIFMELPKEVKVETLAERGKLPQIKLSSIDKQLLGQVAAKIRSLRKPEPYKGKGIKFQGEVLRKKAGKA 181          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A1V6H567_9BACT (50S ribosomal protein L6 n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V6H567_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.160e-6
Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   34 SLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRS---IRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKS 145
            SL  + + GVS GYK  L + G G R    T  N  ++ L LGY+H I+L+LPK    +    R     I L S +  LL  +  KIRSF     YK +G   + E I+   GK+
Sbjct:   71 SLINNMVVGVSEGYKKVLELVGVGFR----TSNNGQILELILGYTHNIYLELPKEVSVETKSERNQNPLILLESCDKQLLGQICAKIRSFRKPEPYKGKGVKFQGEVIRRKAGKT 181          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A0G2RKW1_TUROR (Ribosomal protein L6 n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RKW1_TUROR)

HSP 1 Score: 54.7 bits (130), Expect = 2.290e-6
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 0
Query:   16 VYKDNFVLIHKNYIRTF-FSLFWSYLDGVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGK 144
            +Y+   ++I   Y+ ++  S+F   + GV  GY   L +KG G ++     K    +   LG+SH IF+D+PK    +    +++  L S N+ LL+N    IR +     YK  G    +E +   EGK
Sbjct:   38 IYRKGNMIIFLPYLTSYDSSIFTQAVLGVVLGYSVELILKGIGYKVYKSDEK----LIFSLGFSHSIFIDIPKGVLVRF--NKKTFSLVSANFGLLQNFATSIRRYRFPDSYKGAGVVYANEIVICKEGK 161          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A2E8MX61_9RICK (Uncharacterized protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E8MX61_9RICK)

HSP 1 Score: 54.7 bits (130), Expect = 3.820e-6
Identity = 33/93 (35.48%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   51 LYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDEN-IKIVE 142
            L ++G GL++   T K+   + LKLG+SH I+L +PK     IF ++  I  Y  N I + N   K+++  P+ LY  +GF+L+ +N I++ E
Sbjct:  110 LIIRGAGLKV---TFKDNNCLQLKLGFSHLIYLSIPKTIVVSIFKKKVIIEGY--NQIEVYNYSHKLKNLKPLNLYTGKGFFLKSDNKIELKE 197          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A0A2DUF3_9PORP (50S ribosomal protein L6 n=1 Tax=Porphyromonas sp. COT-239 OH1446 TaxID=1515613 RepID=A0A0A2DUF3_9PORP)

HSP 1 Score: 53.9 bits (128), Expect = 5.890e-6
Identity = 39/107 (36.45%), Postives = 53/107 (49.53%), Query Frame = 0
Query:   42 GVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRS---IRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKS 145
            GVS G+K TL + G G R   + +    ++ L LG++H +FL LPK    +    R     I L S +  LL  +  KIRSF     YK +G   E E I+   GKS
Sbjct:   78 GVSEGFKKTLELVGVGYRASNQGQ----ILELSLGFTHNVFLQLPKEISVETKSERNKNPLIILESADKQLLGQVCTKIRSFRKPEPYKGKGIKFEGEVIRRKSGKS 180          
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Match: A0A7X7LGW2_9BACT (50S ribosomal protein L6 n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7LGW2_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 5.970e-6
Identity = 39/107 (36.45%), Postives = 52/107 (48.60%), Query Frame = 0
Query:   42 GVSHGYKTTLYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIF---GRRRSIRLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKS 145
            GVS GYK    + G G     K   N  ++ L +GYSH IFL+LPK          G+   I L S++  L+  +  KIRSF     YK +G   E E ++   GKS
Sbjct:   79 GVSTGYKIVQELVGVGY----KAANNGQILELAVGYSHSIFLELPKEIKVTTVTERGKNPIITLESIDKQLIGQVAAKIRSFRKPEPYKGKGIKFEGEVLRRKAGKS 181          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78595.18465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9XVF3_9RICK3.730e-7167.28Uncharacterized protein n=1 Tax=Rickettsiales bact... [more]
A0A7X8EIA5_9BACT6.060e-936.9750S ribosomal protein L6 n=1 Tax=Bacteroidales bac... [more]
I4ALV2_BERLS1.570e-835.6550S ribosomal protein L6 n=2 Tax=Cytophagales TaxI... [more]
A0A7T5BN29_9STRA1.740e-830.87Ribosomal protein L6 n=1 Tax=Odontella regia TaxID... [more]
A0A1F3M3X5_9BACT8.480e-730.1450S ribosomal protein L6 n=5 Tax=unclassified Bact... [more]
A0A1V6H567_9BACT1.160e-636.5250S ribosomal protein L6 n=2 Tax=Bacteroidetes Tax... [more]
A0A0G2RKW1_TUROR2.290e-629.23Ribosomal protein L6 n=1 Tax=Turbinaria ornata Tax... [more]
A0A2E8MX61_9RICK3.820e-635.48Uncharacterized protein n=1 Tax=Rickettsiales bact... [more]
A0A0A2DUF3_9PORP5.890e-636.4550S ribosomal protein L6 n=1 Tax=Porphyromonas sp.... [more]
A0A7X7LGW2_9BACT5.970e-636.4550S ribosomal protein L6 n=1 Tax=Bacteroidales bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019906Ribosomal protein L6, bacterial-typePRINTSPR00059RIBOSOMALL6coord: 110..131
score: 25.66
coord: 35..60
score: 33.37
coord: 67..83
score: 32.26
IPR019906Ribosomal protein L6, bacterial-typePANTHERPTHR11655:SF1454S RIBOSOMAL PROTEIN L6, MITOCHONDRIALcoord: 23..145
IPR000702Ribosomal protein L6PIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 2..146
e-value: 2.1E-24
score: 83.9
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 23..145
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 47..147
e-value: 1.4E-12
score: 49.5
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 47..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78595contigM-pyrifera_M_contig78595:33..500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78595.18465.1mRNA_M-pyrifera_M_contig78595.18465.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78595 33..500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78595.18465.1 ID=prot_M-pyrifera_M_contig78595.18465.1|Name=mRNA_M-pyrifera_M_contig78595.18465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
FLSKTKFKLKLNQFFVYKDNFVLIHKNYIRTFFSLFWSYLDGVSHGYKTT
LYVKGKGLRLQLKTRKNKLLIYLKLGYSHKIFLDLPKNCWAKIFGRRRSI
RLYSLNYILLRNLVLKIRSFYPVGLYKFRGFYLEDENIKIVEGKSRLGSG
FGYYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019906Ribosomal_L6_bac-type
IPR000702Ribosomal_L6
IPR036789Ribosomal_L6_a/b-dom_sf