prot_M-pyrifera_M_contig78538.18453.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig78538.18453.1
Unique Name	prot_M-pyrifera_M_contig78538.18453.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	223

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A7W0L574_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0L574_9ACTN)

HSP 1 Score: 192 bits (488), Expect = 5.730e-55
Identity = 105/219 (47.95%), Postives = 145/219 (66.21%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFPA 221
            WQSKKARDL K+L++RR    +R+ ++E LWPDE   K   + SVAL+T R VLDPDKR    H++  DQ +  + +E+L +DVE FL    E  +  R+GD A A   + R+ ++Y G FLEED Y+DWS+A+RE+ R  ++ ++R LA    A GD + A    LRI+ERD +DE+A+L +V  L+A  RHGEARR Y  Y+ QM E+GIE+A FPA
Sbjct:  293 WQSKKARDLVKILVARRGRSTTREYLMETLWPDEDPRKVANRLSVALATLRGVLDPDKRFDPGHFVSGDQHNAKINLEHLNVDVEIFLGQVREGTESQRTGDDAGAFDHLRRAESLYAGDFLEEDPYQDWSVALREEARDCYIKVARALAERAAARGDDEAAVRYLLRILERDAFDEQAYLELVGTLTAAGRHGEARRWYGVYSRQMGEIGIESAPFPA 511

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A4R2CE15_9ACTN (DNA-binding SARP family transcriptional activator n=2 Tax=unclassified Kribbella TaxID=2644121 RepID=A0A4R2CE15_9ACTN)

HSP 1 Score: 192 bits (488), Expect = 2.690e-54
Identity = 103/218 (47.25%), Postives = 142/218 (65.14%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            WQSKKAR L K+L++RR     R+ ++E LWPDE  AK   + SVAL+T R+VLDPDKR   DHYI AD+ ++ L ++ + +DVE+FLA +     L+R G  A  A  + ++AA+Y G FLEED YE W+  +R+Q R  ++ + R LA +       D A   +L ++ +DP+DE+AHLS+V  L    RHGEARR YR YAA+M ELG+ AA FP
Sbjct:  382 WQSKKARTLLKILVARRGRSTPRELLMEQLWPDEDPAKLSNRLSVALATVRAVLDPDKRYAADHYITADRDAMRLDLQQVAVDVEDFLACAGSGLTLVRQGRPAEGAPALTKAAAMYAGDFLEEDTYEHWASDLRDQTRATYITVVRTLAEISVEARQGDAAIGHYLHLLAKDPWDEDAHLSIVRSLETAGRHGEARRHYRGYAARMTELGLPAAPFP 599

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A7J9X1E9_9ACTN (AAA family ATPase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7J9X1E9_9ACTN)

HSP 1 Score: 195 bits (496), Expect = 7.760e-54
Identity = 106/219 (48.40%), Postives = 147/219 (67.12%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFPA 221
            WQSKKARDL K+L+ +R   ++R+ ++E LWPDE   K   +FSVAL+T R VLDPDKR    H++ ADQ+   + +++L +DVE+F A      +  R+GD + A   + R+ ++Y G FLEED YEDWS+A+RE+ R  +V ++R LA    + GD + A    LRI+ERD +DE+A+L +V  LSA  RHGEARR Y  Y+ QM E+GIEAA FPA
Sbjct:  878 WQSKKARDLLKILVGKRGRSVTREYLMETLWPDEEPRKVANRFSVALATLRGVLDPDKRFDPGHFVAADQNDARIDLDHLSVDVEDFFAQVAAGLESQRAGDESEAMDHLTRAESLYSGDFLEEDPYEDWSVAVREEARDSYVKVARALAERAVSRGDDEAAVRYLLRILERDAFDEQAYLELVGTLSAAGRHGEARRWYGAYSRQMEEIGIEAAPFPA 1096

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A7J9ZYV6_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7J9ZYV6_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 3.260e-52
Identity = 105/220 (47.73%), Postives = 145/220 (65.91%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRS--GDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            WQSKKARDL K+L++RR    SR+++ E LWP +   K   + SVAL+T RSVLDP++R   DH++VAD+ SV L + NL +DVE FLA       L R   GD A A   +  +  ++ G FLEED YE+W++ +R++ +  ++ ++R LAR+  + GD D A   +LRI+ERD +DEEAHL +V  L A  RHGEARR YR Y A+M E+ +EAA FP
Sbjct:  866 WQSKKARDLLKVLVARRGRPTSRERLTETLWPGDDPVKLANRLSVALTTVRSVLDPERRFPADHFVVADKGSVRLELRNLTVDVEHFLASVTAGLALEREQRGDEALAL--LRAAEELFAGDFLEEDAYEEWAMPLRDEAQATYISVARALARVSASSGDHDAAVRYFLRILERDTFDEEAHLGLVSTLVAAGRHGEARRRYRTYIARMDEISVEAAPFP 1083

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A6N7IB76_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A6N7IB76_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 3.260e-52
Identity = 102/218 (46.79%), Postives = 140/218 (64.22%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            W+SKKARDLFKMLL RR     R+ +++ LWPDE   +   + SVALST R VLDP++    D+++ AD+  +G+   NLR+DVEEFLA           G+   A   +  + A Y G FLEED YEDW++ +RE+ +  +++ +R LA      G+ D+A   WLR++ERD YDEEAHL++V LL+A  RHGEARR YR Y  +M E+G+E A FP
Sbjct:  894 WRSKKARDLFKMLLGRRGRPTPRELLMDTLWPDEDPVRCANRLSVALSTIRGVLDPEREFAADYFVAADRYVIGIA--NLRVDVEEFLAAVRTGMARYGRGEPG-ALSALREAEAAYTGDFLEEDPYEDWAVPLREEAKAAYLEATRTLAGAAAESGEYDQAVRYWLRVLERDCYDEEAHLALVTLLAAAGRHGEARRRYRLYVERMDEIGVEPAPFP 1108

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A7V0LT62_9ACTN (Tetratricopeptide repeat protein n=3 Tax=Bacteria TaxID=2 RepID=A0A7V0LT62_9ACTN)

HSP 1 Score: 190 bits (482), Expect = 5.820e-52
Identity = 102/220 (46.36%), Postives = 145/220 (65.91%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFPAE 222
            WQSKKARD+ K+L+++R   + R+++ E LWP E   ++  + SVAL+  RS+ DPDK    DHY+  +++SV L +  L +DV+ FLA +    +  R GD A A   +ER+ + YRG FL+ED YEDW++  RE+ R  ++ ++R LA L  ADGD+D A    LRI+E DPYDE AHL ++  + A  RHGEA R Y +Y+A+MAEL IEAA FP +
Sbjct:  845 WQSKKARDIVKILVAKRGNTIHREELTEILWPGESPDRTANRLSVALTVVRSIFDPDKNYPPDHYLKPNRTSVALALGVLDIDVDAFLADAYTGVRAYRRGD-AEAVDMLERAESNYRGDFLQEDPYEDWAVGTREEARAAYLSVARALADLASADGDLDAACRYHLRILELDPYDEAAHLGLIATMDANGRHGEAHRLYLQYSARMAELEIEAAPFPTD 1063

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A6L5FUC8_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L5FUC8_9ACTN)

HSP 1 Score: 186 bits (473), Expect = 9.760e-51
Identity = 104/218 (47.71%), Postives = 140/218 (64.22%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            WQSKKARDL K+L++RR     RD M++ALWP+E   K   + SVAL+T R+VLDP K    D  IV D S++ L + N+ +DVE F A ++    L+RSG+T     ++  +  +Y G FLEED+YEDWS+ +RE+ R  ++ ++R LA      GD + A    LR +ERDPYDE AHLS+V  L    RHGEARR YR Y  +M ELG+E+A FP
Sbjct:  863 WQSKKARDLLKVLIARRGRPTPRDVMLDALWPEESPDKISNRLSVALTTLRTVLDPAKELDIDDLIVTDGSTLALDLANVTVDVEVFFAAADAGTALIRSGETQSGVTKLIDAEGMYAGDFLEEDIYEDWSVPLREEARATYIRIARILADEAVVAGDHEAAIRYMLRSLERDPYDERAHLSLVAALLEVGRHGEARRRYRIYNERMEELGVESAPFP 1080

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: A0A7J9Y2R2_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A7J9Y2R2_9ACTN)

HSP 1 Score: 186 bits (471), Expect = 1.770e-50
Identity = 101/219 (46.12%), Postives = 142/219 (64.84%), Query Frame = 0

Query:    1 ATWQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAF 219
            + W+S+KARDL K+LLSRR   +++DQ+IE LWP E       + +V +ST RS+LDPD++   D ++  D  ++ LR++ L +DVE FLA +    +LLR G  A   + + R+ A Y G FLEED Y DW+  +RE  R+ + +++  LAR  R   D D A    LRI+ERDPYDE++HL +V +L+A  RHG+ARR YR Y A+M ELGIEA  F
Sbjct:  839 SAWKSRKARDLVKILLSRRGRPIAQDQIIETLWPGEAPNAVANRLNVLVSTIRSLLDPDRQAGADGFLSNDGEALRLRLDRLEVDVESFLADATAGTRLLREGRVAEGIERLARAEASYPGDFLEEDPYADWAAPLREGARVTYREVASRLARHARDHNDADAAIRYLLRILERDPYDEDSHLRLVSVLTASGRHGDARRHYRGYCARMEELGIEAVPF 1057

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: UPI0013CF611A (hypothetical protein n=1 Tax=Fodinicola acaciae TaxID=2681555 RepID=UPI0013CF611A)

HSP 1 Score: 184 bits (466), Expect = 7.910e-50
Identity = 103/219 (47.03%), Postives = 141/219 (64.38%), Query Frame = 0

Query:    2 TWQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            TWQSKKARDL K+L++RR   ++R+ +I+ LWPDEP AK   + SVALST R+V DP+ R    H++ AD+ S+ LR  N+ +DVE FLA   +AE     GD +  A     +  +Y G FL ED Y+DW++ +REQ R +++ + R LA      GD D A +  LR +ERD +DE AHL +V  L A  RHG+AR  YR YA++MAE+G+  AAFP
Sbjct:  797 TWQSKKARDLVKILIARRGMAVARETVIDLLWPDEPAAKCANRLSVALSTVRAVFDPEHRYQPAHFLAADKFSLTLR--NVTIDVEVFLAVVRDAEAARHRGDISAYA----LAEGLYTGDFLAEDRYQDWAVPVREQARAKYLSVVRTLADAALKAGDCDEAETYALRALERDEFDEGAHLVLVRALRAAGRHGQARERYRTYASRMAEIGVTPAAFP 1009

[Close]

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Match: UPI0013D70EB6 (tetratricopeptide repeat protein n=1 Tax=Fodinicola acaciae TaxID=2681555 RepID=UPI0013D70EB6)

HSP 1 Score: 182 bits (463), Expect = 2.150e-49
Identity = 105/220 (47.73%), Postives = 144/220 (65.45%), Query Frame = 0

Query:    3 WQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALSTARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEA--EQLLRSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRNLARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARRAYRRYAAQMAELGIEAAAFP 220
            W+SKKARDLFK+L++RR     R+ +++ LWPD+   +   + SVALST R+VLDPD+R   DH++  D+ ++ LR  NL +DVE FLA + +A  E   RS D  RA   +  + A Y G FLEED Y+DW++ +RE+ + R+++L R LA L    G+ DRA    LR +ERD +DEEAHL ++  L A  RHGEA+R Y  Y  QMAE+GIE A FP
Sbjct:  848 WRSKKARDLFKLLVARRGRPTPRESLMDILWPDDDPTRCANRLSVALSTIRTVLDPDRRYPPDHFVGTDKYAIELR--NLAVDVEVFLAIAAKAQTEYERRSADAPRA---LALAEATYSGDFLEEDPYQDWAVPLREEAKARYLELVRLLAGLAENAGEYDRAARYRLRALERDTFDEEAHLGLIGALVAAGRHGEAKRRYEIYRGQMAEIGIEPAPFP 1062

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig78538.18453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7W0L574_9ACTN	5.730e-55	47.95	Tetratricopeptide repeat protein n=1 Tax=Actinomyc...	[more]
A0A4R2CE15_9ACTN	2.690e-54	47.25	DNA-binding SARP family transcriptional activator ...	[more]
A0A7J9X1E9_9ACTN	7.760e-54	48.40	AAA family ATPase n=1 Tax=Actinomycetia bacterium ...	[more]
A0A7J9ZYV6_9ACTN	3.260e-52	47.73	Tetratricopeptide repeat protein n=1 Tax=Actinomyc...	[more]
A0A6N7IB76_9ACTN	3.260e-52	46.79	Tetratricopeptide repeat protein n=1 Tax=Streptosp...	[more]
A0A7V0LT62_9ACTN	5.820e-52	46.36	Tetratricopeptide repeat protein n=3 Tax=Bacteria ...	[more]
A0A6L5FUC8_9ACTN	9.760e-51	47.71	Tetratricopeptide repeat protein n=1 Tax=Actinomyc...	[more]
A0A7J9Y2R2_9ACTN	1.770e-50	46.12	Tetratricopeptide repeat protein n=1 Tax=Micromono...	[more]
UPI0013CF611A	7.910e-50	47.03	hypothetical protein n=1 Tax=Fodinicola acaciae Ta...	[more]
UPI0013D70EB6	2.150e-49	47.73	tetratricopeptide repeat protein n=1 Tax=Fodinicol...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005158	Bacterial transcriptional activator domain	SMART	SM01043	BTAD_2	coord: 84..219 e-value: 3.5E-19 score: 79.7
IPR005158	Bacterial transcriptional activator domain	PFAM	PF03704	BTAD	coord: 84..217 e-value: 1.0E-13 score: 52.0
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..79 e-value: 8.6E-11 score: 43.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 83..218 e-value: 2.0E-19 score: 72.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 79..211
IPR001867	OmpR/PhoB-type DNA-binding domain	PFAM	PF00486	Trans_reg_C	coord: 5..62 e-value: 1.6E-6 score: 28.1
None	No IPR available	PANTHER	PTHR35807	FAMILY NOT NAMED	coord: 5..217
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 145..178 score: 8.201
IPR016032	Signal transduction response regulator, C-terminal effector	SUPERFAMILY	46894	C-terminal effector domain of the bipartite response regulators	coord: 3..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig78538	contig	M-pyrifera_M_contig78538:313..981 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig78538.18453.1	mRNA_M-pyrifera_M_contig78538.18453.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig78538 313..981 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig78538.18453.1 ID=prot_M-pyrifera_M_contig78538.18453.1|Name=mRNA_M-pyrifera_M_contig78538.18453.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
ATWQSKKARDLFKMLLSRRPARLSRDQMIEALWPDEPIAKSQRKFSVALS
TARSVLDPDKREVGDHYIVADQSSVGLRVENLRLDVEEFLAGSEEAEQLL
RSGDTARAAQEMERSAAIYRGQFLEEDLYEDWSIAMREQCRLRFVDLSRN
LARLYRADGDIDRATSQWLRIIERDPYDEEAHLSVVELLSAKRRHGEARR
AYRRYAAQMAELGIEAAAFPAE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005158	BTAD
IPR036388	WH-like_DNA-bd_sf
IPR011990	TPR-like_helical_dom_sf
IPR001867	OmpR/PhoB-type_DNA-bd
IPR019734	TPR_repeat
IPR016032	Sig_transdc_resp-reg_C-effctor