prot_M-pyrifera_M_contig7851.18451.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7851.18451.1
Unique Nameprot_M-pyrifera_M_contig7851.18451.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Match: D8LJ51_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.340e-38
Identity = 136/290 (46.90%), Postives = 145/290 (50.00%), Query Frame = 0
Query:    1 RSLKISQRIEELRLMLSQFGVDVKTSKSAVLSEATDYIAHLQRQHAQSEAERARILQLLQNAQ---------------------------------------------RGAGAD------------------------GKPSTAAAA----------------------------------------PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVFRTVPVPMAIANVNGNLVDCNVRLTQVTGFRKEEVLFMTIFDLVADAFLQHTF 181
            RSLKISQRIE+LR MLSQFGVDVK SKSAVLSEATDYIAHLQRQHAQSEAERARILQLL N++                                             RGAG                          G+P++A  A                                        P+       XXX   XXXXXXXXXXXXXXXXXX                VFRT+P+PMAIANVNGNLVDCN RLTQVTGFRKEE LFMTIFDLVAD FLQHTF
Sbjct:  282 RSLKISQRIEDLRRMLSQFGVDVKASKSAVLSEATDYIAHLQRQHAQSEAERARILQLLHNSRAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGGDRGAGVGVVVERPSSNTMLDTLLSLDDDGDMGRPTSAMTAARAMVFPPPTPPQQGEEQIVPGFPSLSATARRGADGMPVAPSAAAGAAAXXXGRAXXXXXXXXXXXXXXXXXXNLAATARALSHVNYERVFRTLPMPMAIANVNGNLVDCNTRLTQVTGFRKEEALFMTIFDLVADPFLQHTF 571          
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Match: A0A835Z815_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z815_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.660e-24
Identity = 100/181 (55.25%), Postives = 122/181 (67.40%), Query Frame = 0
Query:    1 RSLKISQRIEELRLMLSQFGVDVKTSKSAVLSEATDYIAHLQRQHAQSEAERARILQLLQNAQRGAGADGKPSTAAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVFRTVPVPMAIANVNGNLVDCNVRLTQVTGFRKEEVLFMTIFDLVADAFLQHTF 181
            RSLKISQ+I+ELR +L Q GV VK+SKS +L EAT  I  LQR+ A  E ER  +LQL+Q      G  G  S  A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +F    +P+A+ +VNGN+VDCN R+   TG+R+EE+L +T+F+LVADAFLQ +F
Sbjct:   79 RSLKISQKIDELRALLRQSGVMVKSSKSNILQEATQLICALQRRQALLEGERNHLLQLVQ------GLSGSSSAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVGMDYQL-------IFHNAAIPLAVGSVNGNIVDCNARMCAFTGYRREELLALTVFNLVADAFLQQSF 246          
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Match: A0A835YRU1_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.090e-23
Identity = 99/181 (54.70%), Postives = 122/181 (67.40%), Query Frame = 0
Query:    1 RSLKISQRIEELRLMLSQFGVDVKTSKSAVLSEATDYIAHLQRQHAQSEAERARILQLLQNAQRGAGADGKPSTAAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVFRTVPVPMAIANVNGNLVDCNVRLTQVTGFRKEEVLFMTIFDLVADAFLQHTF 181
            RSLKISQRI+ELRL+L Q G+ VK SKS VL E T+ I  L RQ    EAERA +L L+Q    G    G          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +F    +P+A+ ++NGN+V+CN R+   TGFR++E+L +T+F+LVADA+LQ +F
Sbjct:   32 RSLKISQRIDELRLLLRQSGISVKNSKSHVLQEGTNLIKLLLRQQGALEAERAHMLGLVQMLSAGGNTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVGMDYQL----IFHNAAIPLAVCSINGNIVECNSRMCVATGFRRDELLLLTVFNLVADAYLQRSF 208          
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Match: A0A7S4JQS6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQS6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.140e-6
Identity = 70/210 (33.33%), Postives = 95/210 (45.24%), Query Frame = 0
Query:    1 RSLKISQRIEELRLMLSQFGVDV-KTSKSAVLSEATDYIAHLQRQHAQSEAERARILQLLQNAQRGA----------------------GADGKPSTAA------AAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVFRTVPVPMAIANVNGNLVDCNVRLTQVTGFRKEEVLFMTIFDLVADAFLQHTF 181
            RS +IS++I ELR +LS  GV V K +KSAVL+EA +YI  LQ+   +SE +R +++Q +Q    GA                         G P  +A       A                    XXXXXXXXXX                   VF +  V MAIA++ G  +DCN    Q++ + K+EV  MTIF+L +   LQH F
Sbjct:  261 RSFRISKQINELRNLLSSGGVIVPKGTKSAVLTEAANYIRMLQQHQYKSEIDRHQLVQQMQIIGNGALGPQAATAVRHVAAQNGVWSLGNFGGVPPRSAMTYYQQGAYGSPGPATASMDGSQPQQTPXXXXXXXXXXETKPDPQLVSKIDDHEYRYVFNSCSVGMAIASMGGAFIDCNSLFCQLSQYSKQEVCAMTIFNLTSRQDLQHAF 470          
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Match: A0A7S1B928_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B928_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.140e-6
Identity = 57/183 (31.15%), Postives = 80/183 (43.72%), Query Frame = 0
Query:    1 RSLKISQRIEELRLMLSQFGVDV-KTSKSAVLSEATDYIAHLQRQHAQSEAERARILQLLQNAQRGAGADGKPSTAAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVFRTVPVPMAIANVNGNLVDCNVRLTQVTGFRKEEVLFMTIFDLVADAFLQHTFR 182
            RS +IS++I  LR +LS  GV V K +KS+VL+EA  YI  LQ+   +SE ER +++Q +Q    G GA G  + AA   T                                              EVF T  V MA+A++ G  V  N      +G+ K+E+  +TIF+L     LQ  F 
Sbjct:  315 RSYQISKQICGLRELLSAGGVIVPKGTKSSVLTEAASYIRMLQQHQYRSEIERQQLIQQIQMI--GKGALGPQAAAAIRHTAAKNGIWPLGSFGGVPPMSAMTSSPRPSGSSTKDSYDYT-------EVFNTTAVAMALASMGGTFVAANKLFLIKSGYTKQELCSLTIFNLTQREDLQTAFE 488          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7851.18451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJ51_ECTSI1.340e-3846.90N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECT... [more]
A0A835Z815_9STRA5.660e-2455.25BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YRU1_9STRA8.090e-2354.70BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S4JQS6_9STRA2.140e-633.33Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1B928_9STRA2.140e-631.15Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D3.30.450.20coord: 115..182
e-value: 5.1E-6
score: 28.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 4..42
e-value: 1.0E-6
score: 28.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 1..41
score: 10.626
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 3..64
e-value: 2.3E-10
score: 42.1
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 3..56
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 128..178
e-value: 9.1E-6
score: 23.8
IPR000014PAS domainPROSITEPS50112PAScoord: 121..164
score: 9.46
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 117..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7851contigM-pyrifera_M_contig7851:2630..3679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7851.18451.1mRNA_M-pyrifera_M_contig7851.18451.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7851 2630..3679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7851.18451.1 ID=prot_M-pyrifera_M_contig7851.18451.1|Name=mRNA_M-pyrifera_M_contig7851.18451.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
RSLKISQRIEELRLMLSQFGVDVKTSKSAVLSEATDYIAHLQRQHAQSEA
ERARILQLLQNAQRGAGADGKPSTAAAAPTAAAGSAAAGAAGPSAGGPAP
AVPKAAAAAAAAAAAAAAAAAAAAAAEVFRTVPVPMAIANVNGNLVDCNV
RLTQVTGFRKEEVLFMTIFDLVADAFLQHTFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
IPR000014PAS
IPR035965PAS-like_dom_sf