prot_M-pyrifera_M_contig785.18449.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig785.18449.1
Unique Nameprot_M-pyrifera_M_contig785.18449.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
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BLAST of mRNA_M-pyrifera_M_contig785.18449.1 vs. uniprot
Match: A0A6H5JUA1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUA1_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 3.550e-7
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    1 MEILVVAFVLEDVADTFGLNSVQKGLIGSASFF 33
            MEILVVAFVLED+A TF L SV KGLIGSASFF
Sbjct:   23 MEILVVAFVLEDIATTFELGSVGKGLIGSASFF 55
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BLAST of mRNA_M-pyrifera_M_contig785.18449.1 vs. uniprot
Match: D7FV27_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV27_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 3.900e-5
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    1 MEILVVAFVLEDVADTFGLNSVQKGLIGSASFF 33
            ME+LV+AF LE +A +F L+SV+KGLIGSASFF
Sbjct:    1 MEVLVLAFALEAIATSFELSSVEKGLIGSASFF 33
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig785.18449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUA1_9PHAE3.550e-784.85MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FV27_ECTSI3.900e-569.70Major facilitator transporter n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig785contigM-pyrifera_M_contig785:10647..10760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig785.18449.1mRNA_M-pyrifera_M_contig785.18449.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig785 10626..10760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig785.18449.1 ID=prot_M-pyrifera_M_contig785.18449.1|Name=mRNA_M-pyrifera_M_contig785.18449.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MEILVVAFVLEDVADTFGLNSVQKGLIGSASFFVEPE*
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