prot_M-pyrifera_M_contig7848.18440.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7848.18440.1
Unique Nameprot_M-pyrifera_M_contig7848.18440.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
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BLAST of mRNA_M-pyrifera_M_contig7848.18440.1 vs. uniprot
Match: A0A6H5KZ75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ75_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 4.110e-5
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0 
Query:    1 MDNIIQRFEKVLSFRESREET-------TALPKQPPLPQPEPVKDSRDRSVSARPMTVXXXXXXXXXXXXXXXSVASSLHFDDELSALGSAQSNTKHNENTERYRR 99
            MDN++QR        ++  E        +A P+ PPLP P P  ++R R VSAR +T+   XXXXXXXXXXXXSVAS LHFDDELSA  S  SN++H E+ +R +R
Sbjct:  106 MDNVVQRLATYFPPDDTEGEPNTDVVPPSAAPELPPLPLPPP-DNARGRYVSARVLTMDRAXXXXXXXXXXXXSVASGLHFDDELSA--STASNSRHGEDEQRAKR 208
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7848.18440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZ75_9PHAE4.110e-550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7848contigM-pyrifera_M_contig7848:3962..4568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7848.18440.1mRNA_M-pyrifera_M_contig7848.18440.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7848 3962..4568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7848.18440.1 ID=prot_M-pyrifera_M_contig7848.18440.1|Name=mRNA_M-pyrifera_M_contig7848.18440.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
MDNIIQRFEKVLSFRESREETTALPKQPPLPQPEPVKDSRDRSVSARPMT
VDRAVSAWRLTTDRAVSVASSLHFDDELSALGSAQSNTKHNENTERYRRG
QRRMTALRRRSRDRGGRNGANKR
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