prot_M-pyrifera_M_contig7845.18438.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7845.18438.1
Unique Nameprot_M-pyrifera_M_contig7845.18438.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length233
Homology
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 7.710e-92
Identity = 150/234 (64.10%), Postives = 176/234 (75.21%), Query Frame = 0
Query:    1 QLASFYVKDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLIMPIIEIQRCLPCMGMQQLVDTEDADSLHQGWRPTPLGSMWLECAMCLFYAYDLYQVRISRWTRVILPFLFISRRTYLKHFVSGMVRVLPRQEKRESVPPALISSSLYMMTPVFFLMSFVGFFYAFLGYVFFRGDSRDESFLTGLPLFDQPGSSAMTFLRIFMSIPFMLDTEKKYGGRK-VRTVG 233
            ++AS YVKDALAGRESP CI DQ  L AL+LVRNKAWN +LN+CTI HL++PI+EIQRCLPCMGMQ++ ++ D++SLH GWRPT LGSMWLEC +CL Y YDLY+V ++RW+RV LPFLFISRRTYLKHFV G++RVLPR                  M PV FLMSFV FFYAF+GYV +R + R  S L  L LF QP SSAMTFLRIF SIPFMLD E  Y G K +R +G
Sbjct:   75 EVASIYVKDALAGRESPTCIHDQNSLRALKLVRNKAWNQLLNICTIAHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKVALARWSRVTLPFLFISRRTYLKHFVGGVIRVLPR------------------MLPVAFLMSFVVFFYAFIGYVLYRDEPRSSSLLQDLDLFSQPSSSAMTFLRIFTSIPFMLDVEHIYAGTKGIRVMG 290          
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 5.850e-78
Identity = 146/309 (47.25%), Postives = 177/309 (57.28%), Query Frame = 0
Query:    1 QLASFYVKDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLIMPIIEIQRCLPCMGMQQLVDTEDADSLHQGWRPTPLGSMWLECAMCLFYAYDLYQVRIS---------------------------------------------------------------------------RWTRVILPFLFISRRTYLKHFVSGMVRVLPRQEKRESVPPALISSSLYMMTPVFFLMSFVGFFYAFLGYVFFRGDSRDESFLTGLPLFDQPGSSAMTFLRIFMSIPFMLDTEKKYGGRK-VRTVG 233
            ++AS YVKDALAGRESP C+ +Q  L AL+LVRNKAWN +LN+CTI+HL++PI+EIQRCLPCMGMQ++ ++ D++SLH GWRPT LGSMWLEC +CL Y YDLY+V ++                                                                           RW+RV LPFLFISRRTYLKHFV G++RVLPR                  M PV FLMSFV FFYAF+GY+ +R + R  S L  L LF QP SSAMTFLR+F SIPFMLD E  Y G K +R +G
Sbjct:  137 EVASIYVKDALAGRESPTCMHNQNSLRALKLVRNKAWNQLLNICTIVHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKVALASNHVHKRSHRGGGSDRDGDRDIGVSKGEGAKASSWHSSLARLPPWQLARTCMVALLAFGLLTNIFAHYAFKITWHRWSRVTLPFLFISRRTYLKHFVGGVIRVLPR------------------MLPVVFLMSFVVFFYAFIGYILYRDEPRTSSLLQDLDLFSQPSSSAMTFLRMFTSIPFMLDVEHIYAGTKGIRVMG 427          
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Match: D7FGS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS0_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 6.680e-39
Identity = 87/266 (32.71%), Postives = 123/266 (46.24%), Query Frame = 0
Query:    1 QLASFYVKDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLIMPIIEIQRCLPCMGMQQLVDTEDADSLHQGWRPTPLGSMWLECAMCLFYAYDLYQVRISR----------------------------------------------------------------------------------WTRVILPFLFISRRTYLKHFVSGMVRVLPRQEKRESVPPALISSSLYMMTPVFFLMSFVGFFYAFLGYVFFRGD 184
            ++A+ YV+DALAGR+S  CI +++ + AL+  RN AWN +LN+CT++HLI+P++EIQRCL CMG  +   + + ++L  GWRPT LGS+W+EC +C+FY   L Q  +SR                                                                                  W  VILPFLFISRRTYLKHF++  +R+LPR                  M PV FL+      Y F+GY+ +R +
Sbjct:  121 EVAATYVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNICTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTSLGSLWIECVLCVFYTCHLRQEALSRLGSIPVKNGGGXXXXXXXXXXXXXXXXXXXXELERDRPQAEVYSLSALRPWQLARTCMVTVLSVSLVAKLFSHYVFGVTWFSWRHVILPFLFISRRTYLKHFLAATIRLLPR------------------MVPVVFLIXXXXXXYGFIGYIVYRDE 368          
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Match: A0A6H5JGA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGA6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-19
Identity = 39/83 (46.99%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 QLASFYVKDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLIMPIIEIQRCLPCMGMQQLVDTEDADSLHQGWRP 83
            ++A+ YV+DALAGR+S  CI +++ + AL+  RN AWN +LNVCT++HL +P++EIQRCL C+G  +   + + ++L  G RP
Sbjct:   17 EVAAIYVRDALAGRDSSACIHNERSIRALKCFRNDAWNSLLNVCTLVHLTLPMVEIQRCLSCVGPHKRSASLEDNTLFLGIRP 99          
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Match: A0A836CJB1_9STRA (Ion_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.050e-5
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    8 KDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLIMPIIEIQRCLPCM--GMQQLVDTE-----DADSL--HQGWRPTPLGSMWLECAMCLFYAYDL 103
            +DA+ GR+    I  Q+ L A+RL R +    + NV     L++P+IE+     C    ++ + D       D DSL    GWRPT LGS WLE  +C F+ +++
Sbjct:  150 RDAMHGRKIIAHIHTQRQLSAVRLARARPIILIFNVLCFFQLLLPLIEMPMGWECREGAVRSIQDGGVLCELDGDSLAWFVGWRPTMLGSSWLELPICAFFLFEI 254          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7845.18438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FR41_ECTSI7.710e-9264.10Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A6H5L0T6_9PHAE5.850e-7847.25Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FGS0_ECTSI6.680e-3932.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGA6_9PHAE2.110e-1946.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJB1_9STRA5.050e-534.29Ion_trans domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availableTMHMMTMhelixcoord: 159..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7845contigM-pyrifera_M_contig7845:1644..12434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7845.18438.1mRNA_M-pyrifera_M_contig7845.18438.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7845 1644..12434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7845.18438.1 ID=prot_M-pyrifera_M_contig7845.18438.1|Name=mRNA_M-pyrifera_M_contig7845.18438.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
QLASFYVKDALAGRESPICILDQKGLEALRLVRNKAWNHMLNVCTIIHLI
MPIIEIQRCLPCMGMQQLVDTEDADSLHQGWRPTPLGSMWLECAMCLFYA
YDLYQVRISRWTRVILPFLFISRRTYLKHFVSGMVRVLPRQEKRESVPPA
LISSSLYMMTPVFFLMSFVGFFYAFLGYVFFRGDSRDESFLTGLPLFDQP
GSSAMTFLRIFMSIPFMLDTEKKYGGRKVRTVG
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