prot_M-pyrifera_M_contig78399.18426.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78399.18426.1
Unique Nameprot_M-pyrifera_M_contig78399.18426.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
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BLAST of mRNA_M-pyrifera_M_contig78399.18426.1 vs. uniprot
Match: UPI001260ED78 (type II toxin-antitoxin system ParD family antitoxin n=1 Tax=Tautonia marina TaxID=2653855 RepID=UPI001260ED78)

HSP 1 Score: 48.1 bits (113), Expect = 2.320e-5
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 0 
Query:   10 LEDRLEGGPYASLAELIEEALKALDQSVATE----DWLEEKLREAEASGPAAPMTQQDWDDIEREGFERIRAKSPK 81
            +  +L+ G YAS  +++++AL  L Q  A +      +E  L +   SGPA PMT  DWD++EREG   I  +  K
Sbjct:   13 IRSQLQSGKYASEDDVVDQALDLLRQREAEQASERSRVESLLIQGLDSGPATPMTSDDWDEVEREGQRLIAERKAK 88
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BLAST of mRNA_M-pyrifera_M_contig78399.18426.1 vs. uniprot
Match: UPI001993B626 (Type II toxin-antitoxin system ParD family antitoxin n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI001993B626)

HSP 1 Score: 46.6 bits (109), Expect = 9.640e-5
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0 
Query:    2 LPQKLLHELEDRLEGGPYASLAELIEEALKALDQSVATEDWLEEKLREAEASGPAAPMTQQDWDDIEREGFERIRAKSP 80
            LP+ +   +E R++ G +++ +E +  AL   DQ    E+ LE  L E   SGPA PMT QDW +I  E   R++   P
Sbjct:    8 LPKVMKDYVESRVQEGGFSTPSEYMR-ALVREDQKRKAEEKLEALLLEGIQSGPATPMTPQDWKEIRAEVLRRVQRGEP 85
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78399.18426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001260ED782.320e-536.84type II toxin-antitoxin system ParD family antitox... [more]
UPI001993B6269.640e-536.71Type II toxin-antitoxin system ParD family antitox... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038296Antitoxin ParD superfamilyGENE3D1.10.8.1250coord: 8..78
e-value: 8.4E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78399contigM-pyrifera_M_contig78399:691..936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78399.18426.1mRNA_M-pyrifera_M_contig78399.18426.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78399 691..936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78399.18426.1 ID=prot_M-pyrifera_M_contig78399.18426.1|Name=mRNA_M-pyrifera_M_contig78399.18426.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MLPQKLLHELEDRLEGGPYASLAELIEEALKALDQSVATEDWLEEKLREA
EASGPAAPMTQQDWDDIEREGFERIRAKSPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038296ParD_sf