prot_M-pyrifera_M_contig78298.18407.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78298.18407.1
Unique Nameprot_M-pyrifera_M_contig78298.18407.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A7S0PF08_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PF08_CAFRO)

HSP 1 Score: 242 bits (618), Expect = 1.060e-74
Identity = 134/209 (64.11%), Postives = 159/209 (76.08%), Query Frame = 0
Query:    1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXERE-------VSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            MSGGF DLGLLPELV+ATQ  GWLLPSDVQDE+IPLMLGGGDVMVAA+TGSGKTGAF LP +QL +EIR+R       XXXXXXXX          V  A L+VEDRS+ ++V   GL  QSR EH WGGVRG+VG RRGKVYFE T+ DEG+ARVG    +A+ DLGT + G+G+GGT ++S+ RRF+ YGE+FGKGDV+G +L V G
Sbjct:   21 MSGGFPDLGLLPELVKATQTAGWLLPSDVQDEAIPLMLGGGDVMVAAQTGSGKTGAFGLPAVQLAYEIRQRQLSGVGSXXXXXXXXXXXXXXXXPAVGPAALSVEDRSSWLAVDPTGLIAQSRNEHTWGGVRGTVGVRRGKVYFECTMRDEGIARVGAGTVAASLDLGTCSQGFGYGGTAKRSNSRRFEPYGETFGKGDVIGVMLNVTG 229          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A5A8CCU4_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCU4_CAFRO)

HSP 1 Score: 242 bits (618), Expect = 1.650e-70
Identity = 134/209 (64.11%), Postives = 159/209 (76.08%), Query Frame = 0
Query:    1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXERE-------VSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            MSGGF DLGLLPELV+ATQ  GWLLPSDVQDE+IPLMLGGGDVMVAA+TGSGKTGAF LP +QL +EIR+R       XXXXXXXX          V  A L+VEDRS+ ++V   GL  QSR EH WGGVRG+VG RRGKVYFE T+ DEG+ARVG    +A+ DLGT + G+G+GGT ++S+ RRF+ YGE+FGKGDV+G +L V G
Sbjct:    1 MSGGFPDLGLLPELVKATQTAGWLLPSDVQDEAIPLMLGGGDVMVAAQTGSGKTGAFGLPAVQLAYEIRQRQLSGVGSXXXXXXXXXXXXXXXXPAVGPAALSVEDRSSWLAVDPTGLIAQSRNEHTWGGVRGTVGVRRGKVYFECTMRDEGIARVGAGTVAASLDLGTCSQGFGYGGTAKRSNSRRFEPYGETFGKGDVIGVMLNVTG 209          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: E1Z2R1_CHLVA (DEAD box protein 1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z2R1_CHLVA)

HSP 1 Score: 237 bits (604), Expect = 1.890e-70
Identity = 119/205 (58.05%), Postives = 153/205 (74.63%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAE-------GXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            FE++G+ PEL++A +ELGW+LP+ +Q E++PL+LGGGDVM AAETGSGKTGAFALP LQ+VHE  R  +       G      XXXXX +++  A VLN EDR    ++S DGLRCQ+R E AWGG RG+VGA  GKVY+EAT+ DEG+ RVGW+ ++A+ DLGTD  G+GFGGTG+KSH R+FD YGE +G  D +GCLL+  G
Sbjct:    4 FEEVGVSPELIKAVEELGWMLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHETLRTRQQNRAAGTGSNGSGQXXXXXSDQQPPACVLNSEDRDPVFAISPDGLRCQARSEQAWGGCRGTVGAFGGKVYYEATVADEGLCRVGWSTQAASLDLGTDKHGFGFGGTGKKSHNRQFDAYGEPYGLHDTIGCLLDCQG 208          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A2P6VLQ4_9CHLO (DEAD box protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLQ4_9CHLO)

HSP 1 Score: 237 bits (604), Expect = 1.980e-70
Identity = 111/198 (56.06%), Postives = 143/198 (72.22%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            FE+ G+ PEL+ A  ELGW LP+ +Q E++PL+LGGGDVM AAETGSGKTGAFALP LQ+VHE  R  +               + S  VLN EDR A  ++S DGLRCQ+R E AWGG RG+VGA  G+VY+EAT+ DEG+ RVGW+ ++A+ DLGTD  G+G+GGTG+KSH R+F++YGE +G  D +GCLL+  G
Sbjct:    4 FEEAGVAPELISAVDELGWTLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHEALRTRQAARQAGGGGGTAPSAQRSLCVLNAEDRDAVFAISGDGLRCQARSEQAWGGCRGTVGAFSGRVYYEATVSDEGLCRVGWSTQAASLDLGTDKHGFGYGGTGKKSHVRQFEDYGEPYGLNDTVGCLLDSDG 201          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A2P6U292_CHLSO (DEAD box protein 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U292_CHLSO)

HSP 1 Score: 238 bits (607), Expect = 7.750e-70
Identity = 114/199 (57.29%), Postives = 144/199 (72.36%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            FE++G+ PEL+RA +ELGW LP+ +Q E +PL+LGGGD+M AAETGSGKTGAFALP LQ+VHE IR R                    A VLN EDR + +++S DGLRCQ+R E AWGGVRG+VGA  G+VY+EAT+ DEG+ RVGW+ ++A+ DLGTD   +GFGGTG+KSH R FD YGE +G  D +GCLL+  G
Sbjct:  194 FEEVGVAPELIRAVEELGWTLPTPIQAECVPLILGGGDIMAAAETGSGKTGAFALPVLQIVHEAIRTRQRSRQNAPAGGGNGGADAPPACVLNAEDRDSVVAISPDGLRCQARSEQAWGGVRGTVGAFGGRVYYEATVSDEGLCRVGWSTQAASLDLGTDRHSFGFGGTGKKSHNRSFDSYGEPYGLNDTVGCLLDCQG 392          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: D8TVA6_VOLCA (DEAD box protein 1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TVA6_VOLCA)

HSP 1 Score: 230 bits (586), Expect = 1.050e-67
Identity = 125/208 (60.10%), Postives = 156/208 (75.00%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA------VLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARR---GKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            FE+LG++PELV+A +ELGW+LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R      XXXXXXXXX      A      VL+ EDR   ++VS+DG   QSR E +WGGVR ++G      GKVY+E T+ DEG++RVGW+  +A  DLGTD  G+GFGGTG+KSHQR+FD YGE FGKGDV+GC+L+  G
Sbjct:    4 FEELGVMPELVKAVEELGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGAAXXXXXXXXXXXXXGVASPAAECVLSTEDRDLHLAVSSDGCTAQSRSEKSWGGVRATMGVFASCGGKVYYEVTVNDEGLSRVGWSCSTAALDLGTDRLGFGFGGTGKKSHQRQFDSYGEPFGKGDVIGCMLDCTG 211          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A8IRS1_CHLRE (DEAD box protein 1 n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8IRS1_CHLRE)

HSP 1 Score: 226 bits (575), Expect = 3.840e-66
Identity = 120/208 (57.69%), Postives = 146/208 (70.19%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSA-------AVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARR---GKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVG 201
            FE+LG++PEL +A ++LGW+LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+RA          XXXX              VL+ EDR   ++VS DGL  QSR E AWGGVRGSVG      GKVY+E T+ DEG+ RVGW+  +A  +LGTD  GWGFGGTG+KSH R+FD YGE F   DV+GCLL+ G
Sbjct:    4 FEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPMLQIVHETLRQRARSGSAASTSGXXXXXXXXXXXSPAAVPCVLSSEDRELHVAVSPDGLSAQSRSEKAWGGVRGSVGVFASCGGKVYYEVTVTDEGLCRVGWSCPTAALELGTDRLGWGFGGTGKKSHNRQFDSYGEPFALNDVVGCLLDCG 211          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A150H4J5_GONPE (DEAD box protein 1 n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H4J5_GONPE)

HSP 1 Score: 224 bits (571), Expect = 4.720e-66
Identity = 125/213 (58.69%), Postives = 158/213 (74.18%), Query Frame = 0
Query:    1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSA-------AVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRG---KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 202
            M+G FE+LG++PEL +A ++LGW+LP+ VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R     XXXXXXXXXX               L+ EDR   ++VSADG+  QSR E +WGGVR SVG   G   KVY+E T+ DEG++RVGW+  +A+ DLGTD   +GFGGTG+KSH R+FDEYGE FG+GDV+GCLL+  G
Sbjct:    1 MAGAFEELGVMPELCKAVEDLGWMLPTPVQVEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRTRSGAXXXXXXXXXXXXXXXXXXXXXXECCLSSEDRELHVAVSADGMVAQSRSEKSWGGVRASVGVFAGCGGKVYYEVTVTDEGLSRVGWSTPTASLDLGTDRQSFGFGGTGKKSHARQFDEYGEPFGQGDVVGCLLDCSG 213          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A8J4EXT5_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EXT5_9CHLO)

HSP 1 Score: 219 bits (558), Expect = 4.640e-65
Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA-----VLNVEDRSASISVSADGLRCQSRQEHAWGGVR--GSVGARRG-KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLE 199
            FE+LG++PEL +A +ELGW LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R             XX     A      VLN+EDR  ++++S DG   QSR E +WGGVR  G V A  G KVY+E T+ DEG++RVGW+  +A+ DLGTD  G+GFGGTG+KSHQR+FD Y E FG+GDV+GC+L+
Sbjct:    4 FEELGVMPELCKAVEELGWTLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGTAASISSRGXXXXXXXANATVDWVLNIEDRDLNVALSPDGCTAQSRSEKSWGGVRATGGVFASCGDKVYYEVTVNDEGLSRVGWSCPTASRDLGTDRLGFGFGGTGKKSHQRQFDAYAEPFGQGDVIGCMLD 207          
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A8J4B4K7_9CHLO (DEAD box protein 1 n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4B4K7_9CHLO)

HSP 1 Score: 219 bits (558), Expect = 1.120e-63
Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 0
Query:    5 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA-----VLNVEDRSASISVSADGLRCQSRQEHAWGGVR--GSVGARRG-KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLE 199
            FE+LG++PEL +A +ELGW LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R             XX     A      VLN+EDR  ++++S DG   QSR E +WGGVR  G V A  G KVY+E T+ DEG++RVGW+  +A+ DLGTD  G+GFGGTG+KSHQR+FD Y E FG+GDV+GC+L+
Sbjct:    4 FEELGVMPELCKAVEELGWTLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGTAASISSRGXXXXXXXANATVDWVLNIEDRDLNVALSPDGCTAQSRSEKSWGGVRATGGVFASCGDKVYYEVTVNDEGLSRVGWSCPTASRDLGTDRLGFGFGGTGKKSHQRQFDAYAEPFGQGDVIGCMLD 207          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0PF08_CAFRO1.060e-7464.11Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8CCU4_CAFRO1.650e-7064.11Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
E1Z2R1_CHLVA1.890e-7058.05DEAD box protein 1 n=1 Tax=Chlorella variabilis Ta... [more]
A0A2P6VLQ4_9CHLO1.980e-7056.06DEAD box protein 1 n=1 Tax=Micractinium conductrix... [more]
A0A2P6U292_CHLSO7.750e-7057.29DEAD box protein 1 n=1 Tax=Chlorella sorokiniana T... [more]
D8TVA6_VOLCA1.050e-6760.10DEAD box protein 1 n=1 Tax=Volvox carteri f. nagar... [more]
A8IRS1_CHLRE3.840e-6657.69DEAD box protein 1 n=4 Tax=Chlamydomonas TaxID=305... [more]
A0A150H4J5_GONPE4.720e-6658.69DEAD box protein 1 n=1 Tax=Gonium pectorale TaxID=... [more]
A0A8J4EXT5_9CHLO4.640e-6556.86Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A8J4B4K7_9CHLO1.120e-6356.86DEAD box protein 1 n=3 Tax=Volvox TaxID=3066 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.920coord: 93..201
e-value: 3.8E-36
score: 126.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..92
e-value: 1.5E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR12381RIBONUCLEOPROTEINcoord: 93..200
NoneNo IPR availablePANTHERPTHR12381:SF67TWENTY ONE U-RNA (21U-RNA) BIOGENESIS FOULED UPcoord: 93..200
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 28..68
e-value: 2.1E-13
score: 50.4
IPR003877SPRY domainPFAMPF00622SPRYcoord: 134..199
e-value: 2.7E-9
score: 37.2
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 3..31
score: 8.53
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 73..202
score: 11.419
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..69
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 90..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78298contigM-pyrifera_M_contig78298:210..987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78298.18407.1mRNA_M-pyrifera_M_contig78298.18407.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78298 210..987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78298.18407.1 ID=prot_M-pyrifera_M_contig78298.18407.1|Name=mRNA_M-pyrifera_M_contig78298.18407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETG
SGKTGAFALPTLQLVHEIRRRAEGGGEGAAGGGGGGEREVSAAVLNVEDR
SASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVG
WAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEV
GG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR003877SPRY_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR001870B30.2/SPRY
IPR027417P-loop_NTPase
IPR013320ConA-like_dom_sf