prot_M-pyrifera_M_contig77166.18185.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77166.18185.1
Unique Nameprot_M-pyrifera_M_contig77166.18185.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length53
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig77166.18185.1 vs. uniprot
Match: A0A388JRW7_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388JRW7_CHABU)

HSP 1 Score: 47.8 bits (112), Expect = 7.730e-5
Identity = 22/52 (42.31%), Postives = 30/52 (57.69%), Query Frame = 0 
Query:    1 MYQASLLRVVKKTAGEGLFPLFIVDSSHPSRRHLEDVWGAAKRAGFEAYVVD 52
            +Y+AS+ +  KKT  EG F   IVD  +         W AAKR+G+E YV+D
Sbjct: 1213 VYKASMFKAFKKTLEEGRFTFIIVDDRNVLVADFSQYWAAAKRSGYEVYVLD 1264
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77166.18185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A388JRW7_CHABU7.730e-542.31Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026314YLP motif-containing protein 1PANTHERPTHR13413YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAPcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77166contigM-pyrifera_M_contig77166:103..261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77166.18185.1mRNA_M-pyrifera_M_contig77166.18185.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77166 88..261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77166.18185.1 ID=prot_M-pyrifera_M_contig77166.18185.1|Name=mRNA_M-pyrifera_M_contig77166.18185.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
MYQASLLRVVKKTAGEGLFPLFIVDSSHPSRRHLEDVWGAAKRAGFEAYV
VDL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026314YLP_motif_con_p1