prot_M-pyrifera_M_contig76908.18124.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76908.18124.1
Unique Nameprot_M-pyrifera_M_contig76908.18124.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
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BLAST of mRNA_M-pyrifera_M_contig76908.18124.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.790e-41
Identity = 85/120 (70.83%), Postives = 95/120 (79.17%), Query Frame = 0 
Query:    1 MDRHNLNRYEDESRRTLRRGISHFLSPQLQVLIKEKPRIALAEKAEFAELLSEELSGRPIQELSIDLLRRSFMIRRRVANVSSPTYDDDEASAPGRPPVPPDVPFAEQTTNKASPAFAKK 120
            MDRH L+RY+ ESRRTLR+GISHFLSPQLQVLIKEKPRIALAEKA FAELLSEE SGR I+ELS+DL+RRSFMIR+RVA  S+               VPPD+P A QTTNK SPAFA+K
Sbjct:   14 MDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRRIEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXX--VPPDMPAALQTTNKLSPAFARK 131
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76908.18124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JP76_9PHAE5.790e-4170.83Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76908contigM-pyrifera_M_contig76908:453..812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76908.18124.1mRNA_M-pyrifera_M_contig76908.18124.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76908 441..812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76908.18124.1 ID=prot_M-pyrifera_M_contig76908.18124.1|Name=mRNA_M-pyrifera_M_contig76908.18124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MDRHNLNRYEDESRRTLRRGISHFLSPQLQVLIKEKPRIALAEKAEFAEL
LSEELSGRPIQELSIDLLRRSFMIRRRVANVSSPTYDDDEASAPGRPPVP
PDVPFAEQTTNKASPAFAKK
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