prot_M-pyrifera_M_contig76702.18079.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76702.18079.1
Unique Nameprot_M-pyrifera_M_contig76702.18079.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Match: A0A6L8EXI2_9BACT (WD40 repeat domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6L8EXI2_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.110e-5
Identity = 40/156 (25.64%), Postives = 74/156 (47.44%), Query Frame = 0
Query:   52 LYLVRFSPDGRHVLCG-GIGAWESPVILSVPDLRVVGECGGGSGDVYGGAWMPDGETFVAGGGDDGVLRVWRKEGGDVVCEKRVGMGSVC----SVDVHPDGREYAVGFHEGKKVVIFSVESHEELRRIDIPGYVRSARYSPDGGRLAVAHESGVV 202
            + L+RFSPDG H++ G  +GAW    +  VPD        G +G V   A+  DG+TF +GG  + V++VW     DV  + ++    +     S+       E  +  +  ++V  +  ++ ++L    +   + +  +S DG  LA+   +G +
Sbjct:   43 INLIRFSPDGTHLVVGTDVGAW----VYDVPDGNETALFTGHTGQVNALAFSSDGKTFASGGFVNPVIQVW-----DVETKSKLSTVPLTREPYSLPALTFYGEILISTNGHREVTYWHADTGQKLSESHLDTSINTVTFSQDGSTLAIGDRNGRI 189          
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Match: UPI001C000A16 (helix-turn-helix domain-containing protein n=1 Tax=Phycicoccus mangrovi TaxID=2840470 RepID=UPI001C000A16)

HSP 1 Score: 55.5 bits (132), Expect = 1.660e-5
Identity = 31/86 (36.05%), Postives = 43/86 (50.00%), Query Frame = 0
Query:    9 TCFSCDISPDGRYTVSCGGDGSVMLWDGDGGKVGEVRNPD-GKQLYLVRFSPDGRHVLCGGIGAWE-----SPVILSVPDLRVVGE 88
            T F+     +GR  ++   DGS++LW  DG +       D G  LY  RFSPDG HVL GG+G +      S  + +    R VG+
Sbjct: 1152 TTFTLQFDAEGRRLLAAVNDGSLVLWRRDGTRFTRSLVLDRGTPLYFARFSPDGSHVLAGGLGGYTKLAPTSAALATTSLCRTVGD 1237          
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Match: UPI001A5210C3 (Uncharacterized protein n=2 Tax=Acrocarpospora phusangensis TaxID=1070424 RepID=UPI001A5210C3)

HSP 1 Score: 53.9 bits (128), Expect = 5.580e-5
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 0
Query:   43 EVRNPDGKQLYLVRFSPDGRHVLCGG----IGAWESP---VILSVPDLRVVGECGGGSGDVYGGAWMPDGETFVA---GGGDDGVLRVWRKEGGDVVCEKRVGMGSVCSVDVHPDGREYAVGFHEGKKVVIFSVESHEELRRIDIPGYVRSARYSPDGGRL-AVAHESGVV 202
            +V  PDG+Q++ +RFS DGRH++ G     +  WE+    ++    + R + E       V   A+  DG T V    G    G+L V     G V  ++ VG   + ++ + PDG   AVG  EG+ V +  +    +L      G V +  +SPDG  L A    +GVV
Sbjct:  752 QVFKPDGRQVFAMRFSVDGRHLVTGDDQGYVSVWEAKTGKLLAQYGEHRRL-EPSKVPPTVLQAAFDADGRTLVTLAEGMSAIGILIVRDMPSGTVRFQREVGQ-RMRTMALSPDGTRIAVGDVEGR-VRVIDLRGGPDLTFRYADGRVAALAFSPDGTHLFAAIRHTGVV 919          
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Match: A0A2E3DN54_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DN54_9PLAN)

HSP 1 Score: 52.8 bits (125), Expect = 8.540e-5
Identity = 45/167 (26.95%), Postives = 81/167 (48.50%), Query Frame = 0
Query:   11 FSCDISPDGRYTVSCGGDGSVMLWDGDGGKVGEVRNPDGKQLYLVRFSPDGRHVLCGGIGAWESPVILSVPDLRVVGECGGGSGDVYGGAWM-PDGETFVAGGGDDGVLRVWRKEGGDVVCEKRVGMGSVC-SVDVHPDGREYAVGFHEGKKVVIFSVESHEELRRI 175
            +S D S DG+Y V+      ++LWD    +V +        +  VRFSP+G+ +L GG+   +   +++   L      GG +  +   A++  DGE F + G D  ++R+W   GG +   +  GM     S+D  PDG+    G  +G+ + ++S     + ++I
Sbjct:   16 YSVDYSFDGKYIVAGSLSHRILLWDTASWEVRKYTELHADGVSAVRFSPNGKKILTGGLD--KVVKVINTSSLTAEISLGGSNDYIQSVAFIGKDGEQFASTGFDK-LVRIWTI-GGQI--REISGMTERSHSLDTSPDGKYILAGSLQGE-IFVWSPSGEVKFKQI 175          
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Match: A0A317CMC5_9GAMM (Uncharacterized protein n=1 Tax=Leucothrix pacifica TaxID=1247513 RepID=A0A317CMC5_9GAMM)

HSP 1 Score: 53.1 bits (126), Expect = 9.770e-5
Identity = 56/189 (29.63%), Postives = 84/189 (44.44%), Query Frame = 0
Query:   20 RYTVSCGGDGSVMLWD--GDGGKVGEVRNPDGK----QLYLVRFSPDGRHVLCGGIGAWESPVILSVPDLRVVGECGGGSGDVYGGAWMPDGETF-VAGGGDDGVLRVWRKEGGDVVCEKRVGMGSVCSVDVHPDGREYAVGFHEGKKVVIFSVESHEELRRIDIPGYVR--SARYSPDGGRLAVAHES 199
            RY V+   D ++ +WD    G  +  +R P GK    +LY V  SPDG  +  GG  A +S  +    +  ++    G    +    +  DG    VA GG +G+ RV+    G  +       G   SVD    GR  +  + +G  V+     S   L+R    G  R  SAR+SPDG ++AV  E+
Sbjct:   55 RYAVTASDDKTLRVWDIRNQGKLLRTIRPPIGKGNEGKLYAVAISPDGEVIAAGGWTADDSFYLFKRSNGHMIRRIRGLPNVINDLVFSYDGRKLAVALGGSNGI-RVFDSATGRALSSDTQYSGISLSVDFDKQGRLVSASY-DG--VIRLYDPSFRLLKRYRAQGGNRPYSARFSPDGRKIAVGFEN 239          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76702.18079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6L8EXI2_9BACT1.110e-525.64WD40 repeat domain-containing protein n=1 Tax=Cand... [more]
UPI001C000A161.660e-536.05helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI001A5210C35.580e-530.41Uncharacterized protein n=2 Tax=Acrocarpospora phu... [more]
A0A2E3DN54_9PLAN8.540e-526.95Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A317CMC5_9GAMM9.770e-529.63Uncharacterized protein n=1 Tax=Leucothrix pacific... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 125..165
e-value: 47.0
score: 6.4
coord: 168..201
e-value: 480.0
score: 0.1
coord: 2..35
e-value: 0.11
score: 21.6
coord: 82..122
e-value: 6.4E-4
score: 29.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 6..35
e-value: 2.5E-4
score: 21.8
coord: 95..121
e-value: 0.013
score: 16.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 3..35
score: 10.408
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..71
e-value: 5.3E-12
score: 47.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 85..202
e-value: 1.6E-18
score: 68.6
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 93..195
coord: 53..154
coord: 6..122
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 22..36
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 3..131
score: 10.258
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76702contigM-pyrifera_M_contig76702:104..709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76702.18079.1mRNA_M-pyrifera_M_contig76702.18079.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76702 104..709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76702.18079.1 ID=prot_M-pyrifera_M_contig76702.18079.1|Name=mRNA_M-pyrifera_M_contig76702.18079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MGREKHGKTCFSCDISPDGRYTVSCGGDGSVMLWDGDGGKVGEVRNPDGK
QLYLVRFSPDGRHVLCGGIGAWESPVILSVPDLRVVGECGGGSGDVYGGA
WMPDGETFVAGGGDDGVLRVWRKEGGDVVCEKRVGMGSVCSVDVHPDGRE
YAVGFHEGKKVVIFSVESHEELRRIDIPGYVRSARYSPDGGRLAVAHESG
VV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf