prot_M-pyrifera_M_contig7626.17978.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7626.17978.1
Unique Nameprot_M-pyrifera_M_contig7626.17978.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length252
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7626.17978.1 vs. uniprot
Match: D8LJ60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ60_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.130e-101
Identity = 175/197 (88.83%), Postives = 182/197 (92.39%), Query Frame = 0 
Query:    1 QINATWPEKCLQPGVTRCTLEHNHRLSGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXXXXXXVAALPGSRVNDPIFRDSMTIIGNALRQALESGADAPGLKRRCEGFAEGLRKTTVAATDNTD-SRKRLR-DGGPVVGGALA 195
            QINATWPEKCLQPGVTRCTLEHNHRL+GPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXX     V +LP SR+NDP+FR+SMTIIGNALRQALESGADA GLKRRCEGFAEGLRKTTVAATDNTD SRKR+R DGG  +G   A
Sbjct:  179 QINATWPEKCLQPGVTRCTLEHNHRLAGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXSPGSVVGSLPSSRINDPVFRESMTIIGNALRQALESGADAAGLKRRCEGFAEGLRKTTVAATDNTDPSRKRIRVDGGSPLGAGAA 375
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7626.17978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ60_ECTSI2.130e-10188.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7626contigM-pyrifera_M_contig7626:387..1699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7626.17978.1mRNA_M-pyrifera_M_contig7626.17978.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7626 387..1699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7626.17978.1 ID=prot_M-pyrifera_M_contig7626.17978.1|Name=mRNA_M-pyrifera_M_contig7626.17978.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
QINATWPEKCLQPGVTRCTLEHNHRLSGPLRAGRQDPVLPEELLAEHVSA
LKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRRAA
AAAAAAAAAAAAAPAAVVAALPGSRVNDPIFRDSMTIIGNALRQALESGA
DAPGLKRRCEGFAEGLRKTTVAATDNTDSRKRLRDGGPVVGGALAPNPML
SAVSPIPGLVTPLPGVPMTAGMALGSPPAAAMPPVLTPAPSAVPEGFVPG
P*
back to top