prot_M-pyrifera_M_contig76258.17977.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76258.17977.1
Unique Nameprot_M-pyrifera_M_contig76258.17977.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
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BLAST of mRNA_M-pyrifera_M_contig76258.17977.1 vs. uniprot
Match: D7FW23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW23_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.260e-45
Identity = 88/145 (60.69%), Postives = 102/145 (70.34%), Query Frame = 0 
Query:    1 MKHPGARSLALGMCLCLLYVGYELARACSLAMFARSGAADGLNWAYTTCGSFLLSVATLAVYGRCVEVFGEGWTLLLSAGGCSVVFLAFAAGLSACDGDSV---VLVAGLFAFRESYVTLIGTQVWALLGAELKHKGPKTSRCWF 142
            M+HPG  SLALG CLCLLY GYELARA SLA+F +S A  GL+ A T+  SF+LSVA L VYG   E  G  WTL++SAGGC VVFLAFA    AC GD+V    ++ GL+AFRE YV LI TQVW LL A LK +G + SR WF
Sbjct:    1 MRHPGGHSLALGWCLCLLYSGYELARASSLALFNKSDA--GLSGALTSTVSFVLSVAMLGVYGVGAEALGGKWTLVVSAGGCCVVFLAFA---FACFGDAVFGRTVICGLYAFREMYVALIATQVWGLLSAALKQRGERESRRWF 140
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BLAST of mRNA_M-pyrifera_M_contig76258.17977.1 vs. uniprot
Match: A0A6H5J832_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J832_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 7.070e-41
Identity = 88/145 (60.69%), Postives = 101/145 (69.66%), Query Frame = 0 
Query:    1 MKHPGARSLALGMCLCLLYVGYELARACSLAMFARSGAADGLNWAYTTCGSFLLSVATLAVYGRCVEVFGEGWTLLLSAGGCSVVFLAFAAGLSACDGDSVV---LVAGLFAFRESYVTLIGTQVWALLGAELKHKGPKTSRCWF 142
            M+HPG   LALG CLCLLY GYELARA SLA+F +S A  GL+ A T+  SF+LSVA L VYG   EV G  WTL++SA GC VVFLAFA    AC GD+ V   +V GL+AFRE YV LI TQVW LL A LK +G + SR WF
Sbjct:    1 MRHPGGHFLALGWCLCLLYSGYELARASSLALFNKSDA--GLSGALTSAVSFVLSVAMLGVYGVGAEVLGGKWTLVVSASGCCVVFLAFA---FACFGDADVSRTVVCGLYAFREMYVALIATQVWELLSAALKQRGERESRRWF 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76258.17977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW23_ECTSI3.260e-4560.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J832_9PHAE7.070e-4160.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..73
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76258contigM-pyrifera_M_contig76258:417..842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76258.17977.1mRNA_M-pyrifera_M_contig76258.17977.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76258 417..842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76258.17977.1 ID=prot_M-pyrifera_M_contig76258.17977.1|Name=mRNA_M-pyrifera_M_contig76258.17977.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
MKHPGARSLALGMCLCLLYVGYELARACSLAMFARSGAADGLNWAYTTCG
SFLLSVATLAVYGRCVEVFGEGWTLLLSAGGCSVVFLAFAAGLSACDGDS
VVLVAGLFAFRESYVTLIGTQVWALLGAELKHKGPKTSRCWF
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