prot_M-pyrifera_M_contig76177.17966.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76177.17966.1
Unique Nameprot_M-pyrifera_M_contig76177.17966.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length304
Homology
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BLAST of mRNA_M-pyrifera_M_contig76177.17966.1 vs. uniprot
Match: UPI00037D3768 (T9SS type A sorting domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00037D3768)

HSP 1 Score: 58.9 bits (141), Expect = 6.050e-6
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:  235 ITRTWTATD--GFSSDTQVQLISVTDDTPPNFTSFPNTFSAECGDSLDPANTGGTPTASDDC 294
            I RTWTAT   G +S T VQ I++ D+ PP+F SFP+  + ECGDS DPA+TG TP+ASD C
Sbjct:  692 IARTWTATSPCGITS-TCVQSITIVDNLPPSFVSFPSDTNVECGDSTDPADTG-TPSASDFC 751
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76177.17966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00037D37686.050e-658.06T9SS type A sorting domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 80..195
e-value: 2.6E-10
score: 42.5
NoneNo IPR availableSUPERFAMILY117074Hypothetical protein PA1324coord: 79..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76177contigM-pyrifera_M_contig76177:124..1035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76177.17966.1mRNA_M-pyrifera_M_contig76177.17966.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76177 124..1035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76177.17966.1 ID=prot_M-pyrifera_M_contig76177.17966.1|Name=mRNA_M-pyrifera_M_contig76177.17966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=304bp
KSDQDTTYRFTLFASGDASTFVQFDLPISAGIVDTDFVIPFTSFVGAPGF
DFTSVGALQIVANVEGLPEVDADMSFLGITANVVGGVVFFDCDQDGVEGF
GEIGYPGVQANLLDMGGNILASAITATDGSFAIVTGPGTYRICLVGSTFS
TPTVPSTGCSDFFTLGASEDRFEDTFGCYVPVEVTAPAGESLDCTECFTA
SSSCTGVATAVGCDSSVTVSSTDSIDTVCTDTFTITRTWTATDGFSSDTQ
VQLISVTDDTPPNFTSFPNTFSAECGDSLDPANTGGTPTASDDCSNFPTV
SYFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold