prot_M-pyrifera_M_contig76119.17956.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76119.17956.1
Unique Nameprot_M-pyrifera_M_contig76119.17956.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig76119.17956.1 vs. uniprot
Match: A0A2V0NLE0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLE0_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 3.660e-8
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    3 VKFHPDGSIVAGCMADGTVKLWDARCDALLQHYAAHSSA 41
            V FHPDG+ +A C AD ++K+WD R DALLQHY AH+ A
Sbjct:  204 VAFHPDGTALASCCADASIKIWDMRSDALLQHYRAHTGA 242
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BLAST of mRNA_M-pyrifera_M_contig76119.17956.1 vs. uniprot
Match: A0A8J2F7Q1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2F7Q1_9DINO)

HSP 1 Score: 51.6 bits (122), Expect = 4.660e-5
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0 
Query:    5 FHPDGSIVAGCMADGTVKLWDARCDALLQHYAAHSSAAHHID 46
            FHPDG+ +A C  D T+K+WD R   L+QHY AH  A   +D
Sbjct:  238 FHPDGTCIASCSDDRTIKIWDLRRRRLIQHYDAHGGAVLDLD 279
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76119.17956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V0NLE0_9CHLO3.660e-861.54Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A8J2F7Q1_9DINO4.660e-550.00Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 97..111
score: 23.97
coord: 12..26
score: 30.91
coord: 54..68
score: 34.8
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 28..67
e-value: 7.2E-6
score: 35.5
coord: 1..25
e-value: 280.0
score: 1.5
coord: 70..110
e-value: 8.1E-8
score: 42.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 71..109
e-value: 3.4E-7
score: 30.8
coord: 2..25
e-value: 4.3E-5
score: 24.2
coord: 31..67
e-value: 4.5E-7
score: 30.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 35..76
score: 15.789
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 77..110
score: 9.439
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..25
score: 10.976
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..124
e-value: 2.5E-33
score: 117.4
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 3..118
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 3..118
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 54..68
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 12..26
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..119
score: 28.634
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76119contigM-pyrifera_M_contig76119:78..452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76119.17956.1mRNA_M-pyrifera_M_contig76119.17956.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76119 51..452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76119.17956.1 ID=prot_M-pyrifera_M_contig76119.17956.1|Name=mRNA_M-pyrifera_M_contig76119.17956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MDVKFHPDGSIVAGCMADGTVKLWDARCDALLQHYAAHSSAAHHIDFHPS
GDFLVSSGQDAAVRIWDLRAGTPLFTLRGHEGAVRGASFSKDGRHFATGG
AVDGVVMVWQADLAAAHSSKTTSPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf