prot_M-pyrifera_M_contig76105.17952.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76105.17952.1
Unique Nameprot_M-pyrifera_M_contig76105.17952.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: UPI00092FBCE9 (E3 ISG15--protein ligase HERC5-like isoform X1 n=4 Tax=Longirostres TaxID=1298654 RepID=UPI00092FBCE9)

HSP 1 Score: 85.5 bits (210), Expect = 2.800e-17
Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    3 SEDGRLFVWGS------GARMSWT----PELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            S+ G LF WG       GAR   T    P+LV+  +G+ V+Q A G  HC+ ++  G   AVY WG N  GQLGLGH KD   P  ITAL+    V V CG +HS  ++
Sbjct:  170 SKGGELFTWGKNSHGQLGARSQITFPKMPQLVKDLQGIPVAQIAAGGAHCLVLSLSG---AVYSWGKNSFGQLGLGHTKDMALPQYITALEHKKTVFVSCGGEHSAVLS 275          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: A0A151NMV5_ALLMI (E3 ISG15--protein ligase HERC5 isoform C n=3 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151NMV5_ALLMI)

HSP 1 Score: 84.7 bits (208), Expect = 5.330e-17
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    3 SEDGRLFVWGS--------GARMSWT--PELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            S+ G LF WG         G+++++T  P+LV+  +G+ V+Q A G  HC+ ++  G   AVY WG N  GQLGLGH KD   P  ITAL+    V V CG +HS  ++
Sbjct: 1125 SKGGELFTWGKNSHGQLGVGSQITFTKMPQLVKDLQGIPVAQIAAGGAHCLVLSLSG---AVYSWGKNSFGQLGLGHTKDVAFPEYITALEHKKTVFVSCGGEHSAILS 1230          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: A0A3Q0G4M9_ALLSI (E3 ISG15--protein ligase HERC5-like isoform X1 n=4 Tax=Alligator TaxID=8495 RepID=A0A3Q0G4M9_ALLSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.460e-16
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    3 SEDGRLFVWGS--------GARMSWT--PELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            S+ G LF WG         G+++++T  P+LV+  +G+ V+Q A G  HC+ ++  G   AVY WG N  GQLGLG+ KD   P  ITAL+    V V CG +HS  ++
Sbjct:  171 SKGGELFTWGKNSHGQLGVGSQITFTKMPQLVKDLQGIPVAQIAAGGAHCLVLSLSG---AVYSWGKNSFGQLGLGYTKDVAFPEYITALEHKKTVFVSCGGEHSAVLS 276          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: R0LLU2_ANAPL (Putative E3 ubiquitin-protein ligase HERC5 (Fragment) n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=R0LLU2_ANAPL)

HSP 1 Score: 79.7 bits (195), Expect = 3.770e-16
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    6 GRLFVWGSGAR----------MSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            G LF WG   R          ++ TP+LV+G +G+ ++Q A G  H VA++  G   AVY WG N  GQLGLGH +D   P+ I AL+    V + CG  H+  ++
Sbjct:    2 GELFTWGQNTRGQLGVGRQVTLTSTPQLVKGLKGIPLAQIAAGGAHSVAVSLSG---AVYSWGKNDFGQLGLGHTEDKDYPSYIEALEHWKTVFISCGADHTAVLS 104          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: A0A093HEJ7_STRCA (E3 ISG15--protein ligase HERC5 (Fragment) n=1 Tax=Struthio camelus australis TaxID=441894 RepID=A0A093HEJ7_STRCA)

HSP 1 Score: 80.1 bits (196), Expect = 8.390e-16
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    4 EDGRLFVWGS--------GARMSWTPE--LVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            E+G LF WG         GA+++ TPE  LV G +G+ ++Q A G  H +A++  G   AVY WG N  GQLGLGH +D   P+ I AL+    V + CG  H+  ++
Sbjct:    1 EEGELFAWGQNTHGQLGVGAQVAHTPEPQLVEGLKGIALAQIAAGGAHSLAVSLSG---AVYSWGKNDFGQLGLGHTEDRDRPSYIRALEHWKTVFISCGADHTAVLS 105          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: A0A7K7V563_EUDEL (HERC5 ligase (Fragment) n=1 Tax=Eudromia elegans TaxID=8805 RepID=A0A7K7V563_EUDEL)

HSP 1 Score: 78.6 bits (192), Expect = 8.420e-16
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 0
Query:    2 PSEDGRLFVWGSGAR----------MSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            P E G LF WG  A            +  P+LV G  G+ ++Q A G+ H +A++    S AVY WG N  GQLGLGH +D   P+ ITAL     V + CG  H+  ++
Sbjct:    2 PREGGELFAWGQNAHGQLGVGRQLCSARDPQLVEGLRGVALAQLAAGAAHSLAVS---VSGAVYSWGKNASGQLGLGHTEDRDCPSYITALQHWKTVFISCGEDHTAVLS 108          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: A0A7K9UZV2_ANSSE (HERC5 ligase (Fragment) n=1 Tax=Anseranas semipalmata TaxID=8851 RepID=A0A7K9UZV2_ANSSE)

HSP 1 Score: 80.1 bits (196), Expect = 9.560e-16
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
Query:    4 EDGRLFVWGSGAR----------MSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            E+G LF WG  A           ++  P LV+G +G+ ++Q A G  H VA++  G   AVY WG N  GQLGLGH +D   P+ I AL+    V + CG  H+  ++
Sbjct:    4 EEGELFAWGQNAHGQLGVGSQVTLAHIPRLVQGLKGIPLAQIAAGGAHSVAVSLSG---AVYSWGKNNFGQLGLGHTEDKDCPSYIEALEHWKTVFISCGADHTAVLS 108          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: UPI002015453F (E3 ISG15--protein ligase HERC5-like isoform X1 n=5 Tax=Alosa TaxID=34772 RepID=UPI002015453F)

HSP 1 Score: 80.5 bits (197), Expect = 1.600e-15
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    3 SEDGRLFVWGS----------GARMSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            +EDG++F WG           G   + +P+ ++   G+ +SQ + G  H  A++  G   AV+GWG N  GQLGLG+  DC  P +ITAL+   IV + CG  H+  +T
Sbjct:  177 TEDGQVFTWGQNSNGQLGLGKGEPSTMSPQPLKSLAGIPLSQISAGGDHSFALSLSG---AVFGWGKNSAGQLGLGNNIDCPEPVQITALNMKKIVHISCGEDHTAVLT 282          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: U3IWC6_ANAPP (HECT domain-containing protein n=5 Tax=Anatidae TaxID=8830 RepID=U3IWC6_ANAPP)

HSP 1 Score: 79.7 bits (195), Expect = 2.970e-15
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    6 GRLFVWGSGAR----------MSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            G LF WG   R          ++ TP+LV+G +G+ ++Q A G  H VA++  G   AVY WG N  GQLGLGH +D   P+ I AL+    V + CG  H+  ++
Sbjct:  103 GELFTWGQNTRGQLGVGRQVTLTSTPQLVKGLKGIPLAQIAAGGAHSVAVSLSG---AVYSWGKNDFGQLGLGHTEDKDYPSYIEALEHWKTVFISCGADHTAVLS 205          
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Match: UPI001B7DFF29 (probable E3 ubiquitin-protein ligase HERC3 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DFF29)

HSP 1 Score: 75.1 bits (183), Expect = 3.150e-14
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 0
Query:    6 GRLFVWGS--GARMSW--------TPELVRGFEGLHVSQCALGSVHCVAIAWEGESAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAVT 101
            G++F WG   G ++           P+ V    G+ V+Q A G  H  A++    S AV+GWG N  GQLGLG  K  H PT +  L+C  IV + CG QH+  +T
Sbjct:  138 GQVFAWGQNVGDQLGLGRAGHHVLRPQCVVALTGIPVAQIAAGGTHSFALS---HSGAVFGWGRNNCGQLGLGDTKTRHLPTYVKQLECKKIVYISCGAQHTALLT 240          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76105.17952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00092FBCE92.800e-1743.12E3 ISG15--protein ligase HERC5-like isoform X1 n=4... [more]
A0A151NMV5_ALLMI5.330e-1741.28E3 ISG15--protein ligase HERC5 isoform C n=3 Tax=A... [more]
A0A3Q0G4M9_ALLSI2.460e-1640.37E3 ISG15--protein ligase HERC5-like isoform X1 n=4... [more]
R0LLU2_ANAPL3.770e-1638.68Putative E3 ubiquitin-protein ligase HERC5 (Fragme... [more]
A0A093HEJ7_STRCA8.390e-1639.81E3 ISG15--protein ligase HERC5 (Fragment) n=1 Tax=... [more]
A0A7K7V563_EUDEL8.420e-1638.18HERC5 ligase (Fragment) n=1 Tax=Eudromia elegans T... [more]
A0A7K9UZV2_ANSSE9.560e-1637.96HERC5 ligase (Fragment) n=1 Tax=Anseranas semipalm... [more]
UPI002015453F1.600e-1536.70E3 ISG15--protein ligase HERC5-like isoform X1 n=5... [more]
U3IWC6_ANAPP2.970e-1538.68HECT domain-containing protein n=5 Tax=Anatidae Ta... [more]
UPI001B7DFF293.150e-1437.74probable E3 ubiquitin-protein ligase HERC3 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 53..100
e-value: 6.4E-13
score: 49.1
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 52..101
score: 15.187
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 6..48
score: 8.796
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 3..101
e-value: 2.2E-23
score: 84.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 3..101
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76105contigM-pyrifera_M_contig76105:197..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76105.17952.1mRNA_M-pyrifera_M_contig76105.17952.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76105 197..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76105.17952.1 ID=prot_M-pyrifera_M_contig76105.17952.1|Name=mRNA_M-pyrifera_M_contig76105.17952.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
MPSEDGRLFVWGSGARMSWTPELVRGFEGLHVSQCALGSVHCVAIAWEGE
SAAVYGWGNNRLGQLGLGHGKDCHTPTRITALDCHDIVEVDCGFQHSTAV
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II