prot_M-pyrifera_M_contig76024.17935.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig76024.17935.1
Unique Name	prot_M-pyrifera_M_contig76024.17935.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	138

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.460e-48
Identity = 84/135 (62.22%), Postives = 106/135 (78.52%), Query Frame = 0

Query:    3 AAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            AAK++K V KG   KV++ RTKVHFY+PKT   ARAP Y RKA+     MDKYR+IK P  +E+AMKK E++NTLV +VDL +NK QIK AVK+LYD+ V KVNTLIRPDG KKA+V+L+ D DALD+A++IGV+
Sbjct:   14 AAKISKKVIKGAHGKVLKIRTKVHFYKPKTLQLARAPRYARKAMPSRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A484E3G8_BRELC (Ribosomal_L23eN domain-containing protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E3G8_BRELC)

HSP 1 Score: 161 bits (407), Expect = 2.620e-48
Identity = 85/135 (62.96%), Postives = 105/135 (77.78%), Query Frame = 0

Query:    3 AAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            AAK++K V KG   KV++ RTKVHFY+PKT   ARAP Y RKAV     +DKYR+IK P  +E+AMKK E+ NTLV +VDL ANK QIK AVK+LYD+ V KVNTLIRPDG KKA+V+L+ D DALD+A++IGV+
Sbjct:   16 AAKLSKKVMKGSHGKVLKIRTKVHFYKPKTLRLARAPRYARKAVPSRNKLDKYRIIKSPLTTESAMKKIEDTNTLVFLVDLLANKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 150

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN)

HSP 1 Score: 160 bits (405), Expect = 4.950e-48
Identity = 83/135 (61.48%), Postives = 104/135 (77.04%), Query Frame = 0

Query:    3 AAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            AAKV+K V KG   K ++ RTKVHFY+PKT   ARAP Y RKAV     MDKYR+IK P  +E+AMKK E++NTLV +VD+ ANK QIK A+K+LYD+   KVNTLIRPDG KKA+V+L+ D DALD+A++IGV+
Sbjct:   14 AAKVSKKVLKGSHGKAVQVRTKVHFYKPKTLKLARAPKYARKAVPTRNKMDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A024G0U8_9STRA (Ribosomal_L23eN domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024G0U8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.460e-47
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 0

Query:    2 KAAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            KAA+V++ + KG   K +++RTKVHFY+PKT   +RAP Y RK+VA    MDKYR+IK P  +E AMKK E+HNTLV  VD+ ANK QIK A+K++YD+   KVNTLIRP+G KKA+V+L+PD DALD+A++IGV+
Sbjct:   14 KAAQVSRKILKGSHGKAVKRRTKVHFYKPKTLKLSRAPKYARKSVATRNKMDKYRIIKAPVTTEPAMKKIEDHNTLVFTVDILANKRQIKDAMKQMYDIKCQKVNTLIRPNGQKKAYVRLTPDYDALDVANRIGVI 149

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: K3WU46_GLOUD (Ribosomal_L23eN domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WU46_GLOUD)

HSP 1 Score: 158 bits (400), Expect = 3.030e-47
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 0

Query:    2 KAAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            KAA V+K + KG   KVI+ RTKVHFY+PKT   ARAP Y RKAV     +DKYR+IK P  +E+AMKK E++NTLV +VD+ ANK QIK AVK+LY++   KVNTLIRPDG KKA+V+L+ D DALD+A++IGV+
Sbjct:   15 KAAVVSKKLTKGSHGKVIKVRTKVHFYKPKTLKLARAPKYARKAVPTRTKLDKYRIIKAPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAVKQLYEIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 150

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A6J8B2C7_MYTCO (RP-L23Ae n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8B2C7_MYTCO)

HSP 1 Score: 155 bits (392), Expect = 9.500e-46
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0

Query:    1 DKAAKVAKTVRKGGRQKVIRK-RTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            DKA K  K V KG   K  RK RT VHFYRPKT +  R P Y R ++ R   +DKYR++K P  +E+AMKK E++NTLV IVD RANK QIK AVK+LYD+ V KVNTLIRPDG KKA+V+L+PD DALD+A+KIG++
Sbjct:   34 DKAMKTRKNVVKGIHSKRSRKIRTSVHFYRPKTLSLPRQPKYPRTSIPRTDRLDKYRIVKFPLTTESAMKKIEDNNTLVFIVDKRANKPQIKLAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 171

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A8K1FMI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMI1_PYTOL)

HSP 1 Score: 154 bits (388), Expect = 1.900e-45
Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 0

Query:    3 AAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            AAKV++ V KG   KV++ R KVHFY+P T   ARAP Y RK+      +DKYR+IK P  +E+AMKK E++NTLV +VDL ANK QIK AVK+LYD+   KVNTLIRPDG KKA+V+L+ D DALD+A++IGV+
Sbjct:   14 AAKVSRKVLKGSHGKVVQVRNKVHFYKPTTLKLARAPKYARKSAPSRNKLDKYRIIKAPLTTESAMKKIEDNNTLVFLVDLLANKRQIKDAVKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: S2JQV0_MUCC1 (50S ribosomal protein L23Ae n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) TaxID=1220926 RepID=S2JQV0_MUCC1)

HSP 1 Score: 152 bits (385), Expect = 6.520e-45
Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 0

Query:    2 KAAKVAKTVRKGGRQKVIRK-RTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            KA    K   KG   K +RK RT  HF+ PKT   +RAP Y RK+VA  P MD+YRVI+ P N+ETAMKK EEHNTL  +VD++ANK QIK AVK LYDV   K+NTLIRPDG KKAFV+L+ D DALD+A+KIG +
Sbjct:   18 KAQAAKKAALKGVNGKAVRKIRTSTHFHIPKTLVLSRAPKYARKSVAHAPRMDQYRVIRQPLNTETAMKKIEEHNTLTFLVDVKANKNQIKDAVKRLYDVEAAKINTLIRPDGYKKAFVRLTADVDALDVANKIGFI 154

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A1X2HIT8_SYNRA (Ribosomal protein L23/L15e core domain-containing protein n=2 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HIT8_SYNRA)

HSP 1 Score: 152 bits (383), Expect = 1.030e-44
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 0

Query:    3 AAKVAKTVRKGGRQKVIRK-RTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            AA   K   KG   K  RK RT  HF+RPKT   +R P Y RK+V  LP MD+YRVI+ P N+ETAMKK EEHNTL  +VD ++NK QIK AVK LYDV  + VNTLIRPDG KKAFV+L+ D DALD+A+KIG++
Sbjct:   11 AAAAKKAALKGVHSKTARKVRTSTHFFRPKTLRLSRKPKYARKSVPHLPRMDQYRVIRFPLNTETAMKKIEEHNTLTFVVDTKSNKHQIKDAVKRLYDVEALSVNTLIRPDGKKKAFVRLTADVDALDVANKIGLI 146

[Close]

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Match: A0A0C9LZB7_9FUNG (Ribosomal protein n=2 Tax=Mucor TaxID=4830 RepID=A0A0C9LZB7_9FUNG)

HSP 1 Score: 152 bits (384), Expect = 1.420e-44
Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 0

Query:    2 KAAKVAKTVRKGGRQKVIRK-RTKVHFYRPKTATSARAPAYTRKAVARLPGMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDVTVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV 137
            KA    K+  KG   K +RK RT  HF+ PKT    RAP Y RK+VA  P MD+YRVI+ P N+ETAMKK EEHNTL  +VD++ANK QIK AVK LYDV   K+NTLIRPDG KKAFV+L+ D DALD+A+KIG +
Sbjct:   32 KALNAKKSALKGVHGKAVRKIRTSTHFHIPKTLVLNRAPKYARKSVAHAPRMDQYRVIRQPLNTETAMKKIEEHNTLTFLVDVKANKNQIKDAVKRLYDVEAAKINTLIRPDGYKKAFVRLTADVDALDVANKIGFI 168

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig76024.17935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3F2RWD3_9STRA	2.460e-48	62.22	Ribosomal_L23eN domain-containing protein n=2 Tax=...	[more]
A0A484E3G8_BRELC	2.620e-48	62.96	Ribosomal_L23eN domain-containing protein n=24 Tax...	[more]
A0A2D4BQZ7_PYTIN	4.950e-48	61.48	60S ribosomal protein L23a putative n=1 Tax=Pythiu...	[more]
A0A024G0U8_9STRA	1.460e-47	58.82	Ribosomal_L23eN domain-containing protein n=3 Tax=...	[more]
K3WU46_GLOUD	3.030e-47	61.03	Ribosomal_L23eN domain-containing protein n=2 Tax=...	[more]
A0A6J8B2C7_MYTCO	9.500e-46	60.87	RP-L23Ae n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8B2...	[more]
A0A8K1FMI1_PYTOL	1.900e-45	59.26	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
S2JQV0_MUCC1	6.520e-45	60.58	50S ribosomal protein L23Ae n=1 Tax=Mucor circinel...	[more]
A0A1X2HIT8_SYNRA	1.030e-44	60.29	Ribosomal protein L23/L15e core domain-containing ...	[more]
A0A0C9LZB7_9FUNG	1.420e-44	60.58	Ribosomal protein n=2 Tax=Mucor TaxID=4830 RepID=A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 18..137 e-value: 1.7E-50 score: 172.0
IPR005633	Ribosomal protein L23/L25, N-terminal	PFAM	PF03939	Ribosomal_L23eN	coord: 2..47 e-value: 2.1E-8 score: 34.2
IPR019985	Ribosomal protein L23	TIGRFAM	TIGR03636	TIGR03636	coord: 61..137 e-value: 2.4E-28 score: 96.3
IPR013025	Ribosomal protein L25/L23	PFAM	PF00276	Ribosomal_L23	coord: 57..119 e-value: 1.6E-15 score: 57.3
IPR013025	Ribosomal protein L25/L23	HAMAP	MF_01369_A	Ribosomal_L23_A	coord: 57..137 score: 21.055
None	No IPR available	PANTHER	PTHR11620	60S RIBOSOMAL PROTEIN L23A	coord: 2..137
None	No IPR available	PANTHER	PTHR11620:SF2	RIBOSOMAL PROTEIN L23A	coord: 2..137
IPR001014	Ribosomal protein L23/L25, conserved site	PROSITE	PS00050	RIBOSOMAL_L23	coord: 115..130
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 55..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig76024	contig	M-pyrifera_M_contig76024:91..942 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig76024.17935.1	mRNA_M-pyrifera_M_contig76024.17935.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig76024 91..942 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig76024.17935.1 ID=prot_M-pyrifera_M_contig76024.17935.1|Name=mRNA_M-pyrifera_M_contig76024.17935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
DKAAKVAKTVRKGGRQKVIRKRTKVHFYRPKTATSARAPAYTRKAVARLP
GMDKYRVIKGPHNSETAMKKTEEHNTLVLIVDLRANKVQIKRAVKELYDV
TVVKVNTLIRPDGTKKAFVKLSPDNDALDIAHKIGVV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR005633	Ribosomal_L23/L25_N
IPR019985	Ribosomal_L23
IPR013025	Ribosomal_L25/23
IPR001014	Ribosomal_L23/L25_CS
IPR012678	Ribosomal_L23/L15e_core_dom_sf