prot_M-pyrifera_M_contig76.17925.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76.17925.1
Unique Nameprot_M-pyrifera_M_contig76.17925.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
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BLAST of mRNA_M-pyrifera_M_contig76.17925.1 vs. uniprot
Match: D7G6H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H9_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.490e-40
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 0 
Query:    1 VGATACLVGCLVQGISPFDDDNLAVWDDRSACDSTTVGCELNTIHYPGILFQAPTVAQPDCAENAISDLSDPPSVAQCKWNGDIHRAQEMYVSTSASSSPFDDENLAVWDNRETCDSTTIGCE 123
            + A+ CLVGC++QGISPFD+DN  VWDDR ACDSTT+GCE+         ++ P V Q +C +N  +DLS   S+ +C W G + +A EM+ + S   SPFD++N  VWD+RE CDSTTIGCE
Sbjct:    1 MAASECLVGCMLQGISPFDEDNEVVWDDREACDSTTIGCEV---------YEEPLVGQFECDDNDFNDLSSSSSLEECSWAGVVRQAVEMFPAISTGISPFDEDNEVVWDDREACDSTTIGCE 114
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76.17925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6H9_ECTSI3.490e-4052.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76contigM-pyrifera_M_contig76:7348..41175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76.17925.1mRNA_M-pyrifera_M_contig76.17925.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76 7348..41175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76.17925.1 ID=prot_M-pyrifera_M_contig76.17925.1|Name=mRNA_M-pyrifera_M_contig76.17925.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
VGATACLVGCLVQGISPFDDDNLAVWDDRSACDSTTVGCELNTIHYPGIL
FQAPTVAQPDCAENAISDLSDPPSVAQCKWNGDIHRAQEMYVSTSASSSP
FDDENLAVWDNRETCDSTTIGCEGISPFDDDNLAVWDDRGACDSSTVGCT
GISPFDDNKLAVWDNRGACDSETIGCEV
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