prot_M-pyrifera_M_contig75938.17917.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75938.17917.1
Unique Nameprot_M-pyrifera_M_contig75938.17917.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length104
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75938.17917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 69..90
e-value: 0.83
score: 10.4
coord: 45..60
e-value: 1.8
score: 9.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..104
e-value: 1.4E-16
score: 62.4
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 20..103
NoneNo IPR availablePANTHERPTHR27000:SF615coord: 20..103
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 19..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75938contigM-pyrifera_M_contig75938:183..1039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75938.17917.1mRNA_M-pyrifera_M_contig75938.17917.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75938 183..1039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75938.17917.1 ID=prot_M-pyrifera_M_contig75938.17917.1|Name=mRNA_M-pyrifera_M_contig75938.17917.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
ERLELRGLLGYATFKSVAHKAEALNLVGNRLEGGIPKEVAKLQALKKLDL
NGNPVGGVKPLGLGGLNDLQELNLGWSILESGIPKELAKLQAPKKLNVNG
NRLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf