prot_M-pyrifera_M_contig75839.17889.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75839.17889.1
Unique Nameprot_M-pyrifera_M_contig75839.17889.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
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BLAST of mRNA_M-pyrifera_M_contig75839.17889.1 vs. uniprot
Match: D7G7R5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7R5_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.020e-62
Identity = 95/137 (69.34%), Postives = 111/137 (81.02%), Query Frame = 0 
Query:    1 TCNVDRYNVLTGEWVELDTVQETHCYSDHAGVASGNDTIYLFGGYTEDYQARNTVVKVEISGVDELSFSTVEPMGIARGDHACVGLPASAEALCIGGFTEADFEYTILRSVERFDMETEQWEDRADMVNPRADFGAG 137
            TCNVDRY+VLTGEW +LD  Q T C+SDH+GVAS + TIYLFGGY +DY A+ TVVKVE+S  D ++FST E M I RGDH+C+ LPA+ E  CIGGFTE ++EYTIL SVERFDMETEQWE +A MV PRADFGAG
Sbjct:  106 TCNVDRYSVLTGEWTQLDVSQATDCFSDHSGVASDDGTIYLFGGYDQDYVAQTTVVKVEVSSDDTMTFSTTEAMTIKRGDHSCIRLPATTEVFCIGGFTEENWEYTILSSVERFDMETEQWESKASMVIPRADFGAG 242
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BLAST of mRNA_M-pyrifera_M_contig75839.17889.1 vs. uniprot
Match: A8IWE8_CHLRE (Predicted protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8IWE8_CHLRE)

HSP 1 Score: 57.0 bits (136), Expect = 8.640e-7
Identity = 45/148 (30.41%), Postives = 65/148 (43.92%), Query Frame = 0 
Query:    7 YNVLTGEWVELDTVQETHCYSDHAGVASGNDTIYLFGGYTEDYQARNTVVKVEISGVDELSFSTVEPM------GIARGDHACVGLPASAEALCIGGFTEADFE-------------YTILRSVERFDMETEQWEDRADMVNPRADFG 135
            YN+    W   D +         A VA     +Y+FGGY E + +  TV +++ +     S +   P+       ++RGD   V +  +  A  +GG TE                 Y  LRSVE FD  ++ W  RADM+NPR DFG
Sbjct:  194 YNISGDSWSFGDKLSRPRIDPCGAAVAG---KVYVFGGYNESFGSLATVEELDPATATATSPAVWAPLPATGNLAVSRGDCRAVAVDKTIYA--VGG-TEYYINPNKSCDGDLWVNCYRFLRSVEAFDPVSKTWSPRADMINPRGDFG 335
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75839.17889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7R5_ECTSI1.020e-6269.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A8IWE8_CHLRE8.640e-730.41Predicted protein n=2 Tax=Chlamydomonas TaxID=3052... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..137
e-value: 1.5E-20
score: 75.3
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 3..135
NoneNo IPR availablePFAMPF13418Kelch_4coord: 28..50
e-value: 1.6E-4
score: 21.6
NoneNo IPR availablePANTHERPTHR46260FAMILY NOT NAMEDcoord: 4..132
NoneNo IPR availablePANTHERPTHR46260:SF3coord: 4..132
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 94..127
e-value: 4.1E-7
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75839contigM-pyrifera_M_contig75839:78..876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75839.17889.1mRNA_M-pyrifera_M_contig75839.17889.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75839 78..876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75839.17889.1 ID=prot_M-pyrifera_M_contig75839.17889.1|Name=mRNA_M-pyrifera_M_contig75839.17889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
TCNVDRYNVLTGEWVELDTVQETHCYSDHAGVASGNDTIYLFGGYTEDYQ
ARNTVVKVEISGVDELSFSTVEPMGIARGDHACVGLPASAEALCIGGFTE
ADFEYTILRSVERFDMETEQWEDRADMVNPRADFGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1