prot_M-pyrifera_M_contig7576.17867.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7576.17867.1
Unique Nameprot_M-pyrifera_M_contig7576.17867.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length106
Homology
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A6H5JKU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU4_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 6.960e-45
Identity = 76/103 (73.79%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    4 LPLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            LPLFGLD+P++RVH VDTPE ++     L +SV+MS+DTETQPSF VGEWHPTSLLQ+ATRDA GEEDVLVIDLLSLKDGL LP+ L+EAL+GPF SP V+KL
Sbjct:  220 LPLFGLDIPEDRVHVVDTPEGVRDAAAVLGRSVLMSVDTETQPSFAVGEWHPTSLLQVATRDANGEEDVLVIDLLSLKDGLFLPESLSEALSGPFGSPSVVKL 322          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: D8LQB4_ECTSI (3\'-5\' exonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.750e-31
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 0
Query:   38 MSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            MSIDTETQPSF VGEWHPTSLLQ+ATRDA GEEDVLVIDLLSLKDGL LP+ L+EAL+GPF SP V+KL
Sbjct:    1 MSIDTETQPSFAVGEWHPTSLLQVATRDADGEEDVLVIDLLSLKDGLLLPESLSEALSGPFGSPNVVKL 69          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A5D6YC74_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC74_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.920e-17
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    5 PLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEW-HPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            P + +D     +HFV + +  QR    LR ++VM  DTET+P F+ G   +P SLLQIA RDARG EDV V+DLL+LK     P++ N ALA  F S +VLKL
Sbjct:   45 PAYSVDATS--IHFVASTDEWQRCVVRLRAAIVMGFDTETKPEFRAGRARNPCSLLQIAMRDARGAEDVFVLDLLALK-----PKLYNAALADIFLSKRVLKL 140          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A024TW10_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW10_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.310e-14
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   16 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFK-VGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            V F+ TP +L    E LR +VV+ +DTET+P FK     +PTSLLQ+A RDA G EDV + DLL+L      P   N+ LA  F +P +LKL
Sbjct:   56 VQFLHTPSQLAACHERLRTAVVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALT-----PSHYNDMLAELFLNPSILKL 142          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A418BAW1_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BAW1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.100e-13
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   16 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFK-VGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            V F+ TP +L    E LR ++V+ +DTET+P FK     +PTSLLQ+A RDA G EDV + DLL+L      P   N+ LA  F +P +LKL
Sbjct:   19 VQFLHTPSQLAACHERLRTAIVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALT-----PSHYNDMLAELFLNPSILKL 105          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A6G0XKK2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKK2_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.500e-13
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   16 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGE-WHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            V F+    +L       +K+VV+ +DTET+P FK G   +PTSLLQIATRD +G+EDV ++DLL+LK G       N+ L+  F +P ++K+
Sbjct:   48 VQFISKASQLANCHACFQKAVVVGLDTETKPEFKKGAPQNPTSLLQIATRDKKGKEDVFILDLLALKPG-----DYNDMLSELFLAPSIVKM 134          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A485KTI5_9STRA (Aste57867_11637 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTI5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.810e-13
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   13 KNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGE-WHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            + RV F+  P ++    E  R +V++ +DTET+P F+ G   + TSLLQIATRDA G+E+V + DLL+LK     P   N+ L+  F +P VLK+
Sbjct:   43 EKRVQFISDPSQVAYCHERFRDAVIIGLDTETKPEFQRGAPQNKTSLLQIATRDAAGKEEVFIFDLLALK-----PIHYNKMLSDVFLAPHVLKM 132          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A7S2XWB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWB0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.330e-12
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    7 FGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSF---KVGEWHPTSLLQIATRDARGEEDVLVIDLLSL 80
            F  D+P  R+ F+D PE L  + ETL +SV++ ID E++PSF   +       ++LQIATRD+ G EDV V+DL +L
Sbjct:   69 FTFDLPAQRLRFIDRPEDLDFVKETLARSVLLGIDCESRPSFLGKRKSREQSVAILQIATRDSAGREDVFVLDLQTL 145          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A1V9YDW6_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDW6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.700e-7
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   16 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEW-HPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 106
            V FV     +      LR +V+  +DTET+P FK     +P SLLQIA RDA+G E+V V+DLL+L          NE L   F +  ++KL
Sbjct:   38 VTFVGAATDIPHCNARLRDAVLAGLDTETKPEFKRNAARNPVSLLQIAVRDAKGVEEVFVLDLLALA-----VDDYNEMLTELFCASDIIKL 124          
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A7X7TZP8_9BACT (3'-5' exonuclease domain-containing protein 2 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7TZP8_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 2.070e-7
Identity = 29/90 (32.22%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   16 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLK 105
            +H +  PE+++R  + L K  V+  DTET+P+F+VGE++P ++LQ+      GE+   +  L   +        L+ AL G  A+P+++K
Sbjct:   18 IHVIRRPEQIERAVKQLEKETVLGFDTETRPTFRVGEYYPPAILQLV-----GEKAAYIFQLRHCR--------LSPALLGLLANPRIVK 94          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JKU4_9PHAE6.960e-4573.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQB4_ECTSI1.750e-3184.063\'-5\' exonuclease family protein n=1 Tax=Ectocar... [more]
A0A5D6YC74_9STRA7.920e-1748.543'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A024TW10_9STRA7.310e-1447.833'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A418BAW1_9STRA1.100e-1346.74T-complex protein 1 subunit gamma n=1 Tax=Aphanomy... [more]
A0A6G0XKK2_9STRA3.500e-1343.48Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A485KTI5_9STRA4.810e-1343.16Aste57867_11637 protein n=2 Tax=Aphanomyces stella... [more]
A0A7S2XWB0_9STRA2.330e-1245.45Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1V9YDW6_9STRA1.700e-740.223'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A7X7TZP8_9BACT2.070e-732.223'-5' exonuclease domain-containing protein 2 n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 10..106
e-value: 1.2E-12
score: 49.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7576contigM-pyrifera_M_contig7576:9935..10777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7576.17867.1mRNA_M-pyrifera_M_contig7576.17867.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7576 9923..10777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7576.17867.1 ID=prot_M-pyrifera_M_contig7576.17867.1|Name=mRNA_M-pyrifera_M_contig7576.17867.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
MLLLPLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKV
GEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFAS
PQVLKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf