prot_M-pyrifera_M_contig75708.17859.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig75708.17859.1
Unique Name	prot_M-pyrifera_M_contig75708.17859.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	348

Homology

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A265DU64_9GAMM (Transcription-repair-coupling factor n=41 Tax=root TaxID=1 RepID=A0A265DU64_9GAMM)

HSP 1 Score: 655 bits (1691), Expect = 1.790e-225
Identity = 340/348 (97.70%), Postives = 343/348 (98.56%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYE+PG+EY+RFAGNFPFEET DQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQS RQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKE TQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHD SIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARV VAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA
Sbjct:  556 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYEAPGDEYLRFAGNFPFEETPDQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSSRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEVTQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDASIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVGVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 903

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: F7SP50_9GAMM (Transcription-repair-coupling factor n=91 Tax=Halomonadaceae TaxID=28256 RepID=F7SP50_9GAMM)

HSP 1 Score: 627 bits (1617), Expect = 2.320e-214
Identity = 319/348 (91.67%), Postives = 338/348 (97.13%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGS+QWEKARRKAAEKIRDTAAELLD+YARREAQ+G +Y++PG+EYVRF  +FPFEET DQ AAIEAVISDM SPQPMDRVVCGDVGFGKTEVAMRAAFLAVQ+GRQVVVLVPTTLLARQHFENFRDRFADTAVNI LISRFTSGKE TQTLESIK+GQTDIVIGTHKLL+KSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAE+DILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ D+S+IKEALLREILRGGQVY LHNEVKTIEN+AE+IREL+PEARVAVAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVPSANTI+IERA
Sbjct:  556 PLHKLGSEQWEKARRKAAEKIRDTAAELLDIYARREAQEGFIYDTPGDEYVRFTASFPFEETPDQQAAIEAVISDMISPQPMDRVVCGDVGFGKTEVAMRAAFLAVQTGRQVVVLVPTTLLARQHFENFRDRFADTAVNISLISRFTSGKEMTQTLESIKNGQTDIVIGTHKLLSKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEIDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRDSSVIKEALLREILRGGQVYFLHNEVKTIENAAEQIRELVPEARVAVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPSANTILIERA 903

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A0P8CKR9_9GAMM (Transcription-repair-coupling factor n=12 Tax=Halomonas TaxID=2745 RepID=A0A0P8CKR9_9GAMM)

HSP 1 Score: 627 bits (1617), Expect = 2.450e-214
Identity = 320/348 (91.95%), Postives = 335/348 (96.26%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGSDQWEKAR+KAAEKIRDTAAELLD+YARREAQ+GVVYE+P ++Y RFAGNFPFEET DQ AAIEAVI+DMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFT GKE ++TLE IK+GQTDIVIGTHKLLA SVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQH   +IKEALLREILRGGQVY LHNEVKTIEN+AE+IR L+PEARVAVAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA
Sbjct:  558 PLHKLGSDQWEKARKKAAEKIRDTAAELLDIYARREAQEGVVYEAPSDDYARFAGNFPFEETPDQQAAIEAVINDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTHGKEMSKTLEDIKNGQTDIVIGTHKLLANSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHQDGVIKEALLREILRGGQVYFLHNEVKTIENAAERIRSLVPEARVAVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 905

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A368U133_9GAMM (Transcription-repair-coupling factor n=4 Tax=Halomonas TaxID=2745 RepID=A0A368U133_9GAMM)

HSP 1 Score: 619 bits (1597), Expect = 2.330e-211
Identity = 315/348 (90.52%), Postives = 335/348 (96.26%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLH+LGS+QWEKAR+KAAEKIRDTAAELLDVYARREAQQGVVYE+PGEEYVRFA +FPFEET DQHAAIEAVI DMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVN+ LISRFT GK+  + LE IK+GQTDIVIGTHKLL+KSVELPKMGLLIIDEEHRFGV QKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ D ++IKEALLRE+LRGGQVY LHNEVKTIEN+AEKIR+L+P+ARVAVAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVP+ANTI+IERA
Sbjct:  556 PLHRLGSEQWEKARKKAAEKIRDTAAELLDVYARREAQQGVVYEAPGEEYVRFATSFPFEETPDQHAAIEAVIQDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNLELISRFTGGKDMNKALERIKNGQTDIVIGTHKLLSKSVELPKMGLLIIDEEHRFGVTQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRDDAVIKEALLRELLRGGQVYFLHNEVKTIENAAEKIRDLVPDARVAVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPTANTILIERA 903

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A7Z0RVW7_9GAMM (Transcription-repair-coupling factor n=3 Tax=Halomonas TaxID=2745 RepID=A0A7Z0RVW7_9GAMM)

HSP 1 Score: 613 bits (1581), Expect = 3.890e-209
Identity = 313/348 (89.94%), Postives = 330/348 (94.83%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGSDQWEKAR+KAAEKIRDTAAELLD+YARREAQ+GVVY SP EEY RFA +FPFEET DQ AAI+AVI DMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNI L+SRFT GK   +TL+ IKSGQTDIVIGTHKLL+KSVELPKMGLLIIDEEHRFGV+QKEKLKTLRAE+DILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ    +IKEALLREILRGGQVY LHNEVKTIEN+AEK+REL+PEARVAVAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVPSANT+IIERA
Sbjct:  541 PLHKLGSDQWEKARKKAAEKIRDTAAELLDIYARREAQEGVVYTSPDEEYDRFAASFPFEETPDQEAAIDAVIDDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNISLVSRFTQGKAMKETLDHIKSGQTDIVIGTHKLLSKSVELPKMGLLIIDEEHRFGVSQKEKLKTLRAEIDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRADGVIKEALLREILRGGQVYFLHNEVKTIENAAEKVRELVPEARVAVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPSANTVIIERA 888

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: UPI001D09C0CB (transcription-repair coupling factor n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D09C0CB)

HSP 1 Score: 611 bits (1576), Expect = 2.250e-208
Identity = 311/348 (89.37%), Postives = 331/348 (95.11%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PL+KLGSDQWEKARRKAAEKIRDTAAELLD+YARREA++G VY++P EEY RFA +FPFEET DQ AAIEAVI DM SPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNI LISRFT GKE T+TLE+IK G  DIVIGTHKLL+KSVELPKMGLLIIDEEHRFGVAQKEKLK+LRAE+DILTLTATPIPRTLNMAMSGIRDLSIIATPPA+RLSVKTFVQQH+ S+IKEALLRE+LRGGQVY LHNEVKTIEN+AEKIREL+PEARV VAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVPSANTI+IERA
Sbjct:  542 PLNKLGSDQWEKARRKAAEKIRDTAAELLDIYARREAREGTVYQAPDEEYARFAASFPFEETPDQKAAIEAVIDDMVSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNISLISRFTGGKEMTKTLENIKEGHADIVIGTHKLLSKSVELPKMGLLIIDEEHRFGVAQKEKLKSLRAEIDILTLTATPIPRTLNMAMSGIRDLSIIATPPAKRLSVKTFVQQHNESLIKEALLRELLRGGQVYFLHNEVKTIENAAEKIRELVPEARVGVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPSANTILIERA 889

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A1M7E9L3_9GAMM (Transcription-repair-coupling factor n=1 Tax=Halomonas subglaciescola TaxID=29571 RepID=A0A1M7E9L3_9GAMM)

HSP 1 Score: 607 bits (1566), Expect = 6.920e-207
Identity = 306/348 (87.93%), Postives = 331/348 (95.11%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGSDQWEKAR+KAAEKIRDTAAELLD+YARREAQQGVVY++PG++Y RF+ +FPFEET DQ AAI AV+ D+T+PQPMDRV+CGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGL+SRFT GK ++  LE IK+GQTDIVIGTHKLL+KSVELPKMGLLIIDEEHRFGV QKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ +  +IKEALLREILRGGQVY LHNEVKTIEN+AEKIREL+P+ARV VAHGQLPERSLER+MSDFYHRRFNVLVCSTIIE+GIDVPSANTI+IERA
Sbjct:  541 PLHKLGSDQWEKARKKAAEKIRDTAAELLDIYARREAQQGVVYDTPGDDYQRFSASFPFEETPDQEAAINAVVRDLTAPQPMDRVICGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLLSRFTGGKGSSDALEKIKNGQTDIVIGTHKLLSKSVELPKMGLLIIDEEHRFGVTQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRNDGVIKEALLREILRGGQVYFLHNEVKTIENAAEKIRELVPDARVVVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIESGIDVPSANTILIERA 888

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A556W0M3_HALSX (Transcription-repair-coupling factor n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A556W0M3_HALSX)

HSP 1 Score: 605 bits (1560), Expect = 5.490e-206
Identity = 309/348 (88.79%), Postives = 327/348 (93.97%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGSDQWEKAR+KAAEKIRDTAAELLD+YARREAQ+GVVY +P +EY RFA +FPFEET DQ AAIEAVI DMTSPQPMDRVVCGDVGFGKTEVAMRAAFLA QS RQVVVLVPTTLLARQH+ENFRDRFADTAVNI LISRFT GK   +TL  I+ GQTDIVIGTHKLL+KSVELP+MGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQ+H+   IKEALLREILRGGQVY LHNEVKTIEN+AEKIREL+P+ARVAVAHGQLPERSLER+MSDFYHRRFNVLVCSTIIETGIDVP+ANTIIIERA
Sbjct:  541 PLHKLGSDQWEKARKKAAEKIRDTAAELLDIYARREAQEGVVYAAPDDEYQRFAASFPFEETPDQQAAIEAVIKDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAAQSNRQVVVLVPTTLLARQHYENFRDRFADTAVNISLISRFTQGKTMNETLSRIREGQTDIVIGTHKLLSKSVELPRMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQRHEDGTIKEALLREILRGGQVYFLHNEVKTIENTAEKIRELVPDARVAVAHGQLPERSLERVMSDFYHRRFNVLVCSTIIETGIDVPNANTIIIERA 888

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: UPI0003488B9F (transcription-repair coupling factor n=1 Tax=Halomonas jeotgali TaxID=553386 RepID=UPI0003488B9F)

HSP 1 Score: 600 bits (1546), Expect = 6.900e-204
Identity = 301/348 (86.49%), Postives = 331/348 (95.11%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PLHKLGS+QWEKAR+KAAEK+RDTAAELLD+YARREA+QGV++++PG++Y RFA +FPFEET DQ AAI+AV+ D+T+PQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVN+ L+SR T GK AT+ L  +K+GQTDIVIGTHKLL+KSVELP+MGLL+IDEEHRFGVAQKEKLKTLRAE+DILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ     IKEALLREILRGGQVYVLHNEVKTI+N+AEKIREL+P+ARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTI+IERA
Sbjct:  541 PLHKLGSEQWEKARKKAAEKVRDTAAELLDIYARREARQGVIHDAPGDDYQRFAASFPFEETPDQKAAIDAVVDDLTAPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNVSLLSRATGGKGATEALNRVKNGQTDIVIGTHKLLSKSVELPQMGLLVIDEEHRFGVAQKEKLKTLRAEIDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRADGTIKEALLREILRGGQVYVLHNEVKTIDNAAEKIRELVPDARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTILIERA 888

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BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Match: A0A2N7UFP7_9GAMM (Transcription-repair-coupling factor n=1 Tax=Halomonas urumqiensis TaxID=1684789 RepID=A0A2N7UFP7_9GAMM)

HSP 1 Score: 580 bits (1494), Expect = 4.480e-196
Identity = 297/348 (85.34%), Postives = 321/348 (92.24%), Query Frame = 0

Query:    1 PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEYVRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMRAAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGKEATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKEKLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAVAHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA 348
            PL++LGS+QWEKARR+AAEKIRDTAAELLD+YARREA+QG     P  EY RFA NFPFEET DQHAAI AVI DMT+ +PMDRVVCGDVGFGKTEVAMRAAFLAV SGRQVVVLVPTTLLARQHFENFRDRFADTAVNI LISRFT GK     L+ I++GQ DIVIGTHKLL+KS++LP MGLLIIDEEHRFGVAQKE+LK+LRAEVDILT+TATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQ D +IIKEALLREILRGGQVY+LHNEVKTIE++AEKIREL+PEARV VAHGQLPERSLER+MSDFYH+RFNVLVCSTIIETGIDVPSANTIIIERA
Sbjct:  543 PLNRLGSEQWEKARRRAAEKIRDTAAELLDIYARREARQGFACAEPDAEYARFAANFPFEETPDQHAAITAVIEDMTAQRPMDRVVCGDVGFGKTEVAMRAAFLAVHSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIELISRFTEGKGQAAALKRIENGQADIVIGTHKLLSKSMKLPNMGLLIIDEEHRFGVAQKERLKSLRAEVDILTMTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRDEAIIKEALLREILRGGQVYLLHNEVKTIESAAEKIRELVPEARVGVAHGQLPERSLERVMSDFYHKRFNVLVCSTIIETGIDVPSANTIIIERA 890

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig75708.17859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A265DU64_9GAMM	1.790e-225	97.70	Transcription-repair-coupling factor n=41 Tax=root...	[more]
F7SP50_9GAMM	2.320e-214	91.67	Transcription-repair-coupling factor n=91 Tax=Halo...	[more]
A0A0P8CKR9_9GAMM	2.450e-214	91.95	Transcription-repair-coupling factor n=12 Tax=Halo...	[more]
A0A368U133_9GAMM	2.330e-211	90.52	Transcription-repair-coupling factor n=4 Tax=Halom...	[more]
A0A7Z0RVW7_9GAMM	3.890e-209	89.94	Transcription-repair-coupling factor n=3 Tax=Halom...	[more]
UPI001D09C0CB	2.250e-208	89.37	transcription-repair coupling factor n=1 Tax=Halom...	[more]
A0A1M7E9L3_9GAMM	6.920e-207	87.93	Transcription-repair-coupling factor n=1 Tax=Halom...	[more]
A0A556W0M3_HALSX	5.490e-206	88.79	Transcription-repair-coupling factor n=1 Tax=Halom...	[more]
UPI0003488B9F	6.900e-204	86.49	transcription-repair coupling factor n=1 Tax=Halom...	[more]
A0A2N7UFP7_9GAMM	4.480e-196	85.34	Transcription-repair-coupling factor n=1 Tax=Halom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 57..247 e-value: 3.0E-36 score: 136.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 75..236 score: 25.077
None	No IPR available	GENE3D	3.40.50.300		coord: 1..238 e-value: 9.0E-89 score: 298.8
None	No IPR available	GENE3D	3.40.50.300		coord: 246..348 e-value: 6.8E-21 score: 76.4
None	No IPR available	PANTHER	PTHR14025	FAMILY NOT NAMED	coord: 6..347
None	No IPR available	PANTHER	PTHR14025:SF29	TRANSCRIPTION-REPAIR-COUPLING FACTOR	coord: 6..347
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 261..345 e-value: 2.2E-13 score: 50.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 249..348 score: 10.379
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 62..222 e-value: 2.7E-20 score: 72.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 239..346
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..240

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig75708	contig	M-pyrifera_M_contig75708:2..1045 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig75708.17859.1	mRNA_M-pyrifera_M_contig75708.17859.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig75708 2..1045 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig75708.17859.1 ID=prot_M-pyrifera_M_contig75708.17859.1|Name=mRNA_M-pyrifera_M_contig75708.17859.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=348bp
PLHKLGSDQWEKARRKAAEKIRDTAAELLDVYARREAQQGVVYESPGEEY
VRFAGNFPFEETADQHAAIEAVISDMTSPQPMDRVVCGDVGFGKTEVAMR
AAFLAVQSGRQVVVLVPTTLLARQHFENFRDRFADTAVNIGLISRFTSGK
EATQTLESIKSGQTDIVIGTHKLLAKSVELPKMGLLIIDEEHRFGVAQKE
KLKTLRAEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFV
QQHDTSIIKEALLREILRGGQVYVLHNEVKTIENSAEKIRELIPEARVAV
AHGQLPERSLERIMSDFYHRRFNVLVCSTIIETGIDVPSANTIIIERA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR027417	P-loop_NTPase