prot_M-pyrifera_M_contig7562.17837.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7562.17837.1
Unique Nameprot_M-pyrifera_M_contig7562.17837.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length276
Homology
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BLAST of mRNA_M-pyrifera_M_contig7562.17837.1 vs. uniprot
Match: D8LNA8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA8_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 3.880e-77
Identity = 160/287 (55.75%), Postives = 181/287 (63.07%), Query Frame = 0 
Query:    1 MQSMALVSGNSNPPHDWAGPAKGDRKALPLGAVLVQPPQARATSNTXXXXXXXXPG--QSRTGAAASAIPLHSITVKGCPSTLPPXXXXXPVMVLFPATLHLSIFLEVPPPTAIASAALALLALLGWWVWDWGMVSSAGFGSGLAAGLVAGLGVRSRPLGGWSCVTLSVLGVALLGGGLPSAIFAAELTFSTFWRHGWWLYLQPECAVVLFML-GTTADVALGFLLSSL-QIYRTQPPQHPRSSEPQSPAVVPIVAGGE----------GQWNAVTPPGLAGVRGGR 273
            MQS+ LV   S P    AGPAKGDR  LPLG ++ +PP A   +  XXXXXXX  G  Q  TG   S  PL+ +  +GCPSTLPP     PVMVLFPATL LSIFL  PPP  +AS  L LLA+LG W     +VS+AG GSGLAAGL AGLGVRSRP+GGW    LSVLG+ALLGGG  S  F   L  ST WRHGWWLY+QPECA VLF+L GTTADVALGFLL+SL QI+R+                  + A               WNAVTPPGLAG+RG R
Sbjct:    1 MQSLVLVDDYSRPAAATAGPAKGDRSLLPLG-LISKPPAAEHGTGXXXXXXXXAAGRPQRPTGEPLSD-PLY-VRAEGCPSTLPPPPAGPPVMVLFPATLPLSIFLAPPPPATLASGVLTLLAILGSWGXXXXLVSAAGVGSGLAAGLTAGLGVRSRPVGGWGFTGLSVLGIALLGGGKASLTFGMSLGLSTLWRHGWWLYVQPECAPVLFLLSGTTADVALGFLLTSLLQIHRSPSXXXXXXXXXXXXXXXXVSAAAAHDHHASGSQADMWNAVTPPGLAGLRGRR 284
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BLAST of mRNA_M-pyrifera_M_contig7562.17837.1 vs. uniprot
Match: A0A6H5LJL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJL3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.770e-17
Identity = 44/62 (70.97%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:  166 SVLGVALLGGGLPSAIFAAELTFSTFWRHGWWLYLQPECAVVLFML-GTTADVALGFLLSSL 226
            SVLG+ALLGGG  S  F   L  +T WRHGWWLY+QPECA V F+L GTTADVALGFLL+SL
Sbjct: 1216 SVLGIALLGGGKASLTFGMSLGLTTLWRHGWWLYVQPECAPVFFLLSGTTADVALGFLLTSL 1277
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7562.17837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNA8_ECTSI3.880e-7755.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5LJL3_9PHAE7.770e-1770.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..152
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
NoneNo IPR availableTMHMMTMhelixcoord: 165..184
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 204..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7562contigM-pyrifera_M_contig7562:4770..7833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7562.17837.1mRNA_M-pyrifera_M_contig7562.17837.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7562 4770..7833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7562.17837.1 ID=prot_M-pyrifera_M_contig7562.17837.1|Name=mRNA_M-pyrifera_M_contig7562.17837.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
MQSMALVSGNSNPPHDWAGPAKGDRKALPLGAVLVQPPQARATSNTTTAS
SSSSPGQSRTGAAASAIPLHSITVKGCPSTLPPPPPGPPVMVLFPATLHL
SIFLEVPPPTAIASAALALLALLGWWVWDWGMVSSAGFGSGLAAGLVAGL
GVRSRPLGGWSCVTLSVLGVALLGGGLPSAIFAAELTFSTFWRHGWWLYL
QPECAVVLFMLGTTADVALGFLLSSLQIYRTQPPQHPRSSEPQSPAVVPI
VAGGEGQWNAVTPPGLAGVRGGRRM*
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