prot_M-pyrifera_M_contig75415.17796.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75415.17796.1
Unique Nameprot_M-pyrifera_M_contig75415.17796.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A2T4WZE3_9BACT (50S ribosomal protein L21 n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A2T4WZE3_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 7.970e-9
Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    2 HTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSI 37
            H +G KV+VFKKKRRKGYRKK G RQH T + IDSI
Sbjct:   66 HQKGDKVIVFKKKRRKGYRKKNGHRQHFTKIKIDSI 101          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A7C9B9F8_9BACT (50S ribosomal protein L21 n=1 Tax=Cytophagaceae bacterium SJW1-29 TaxID=2654236 RepID=A0A7C9B9F8_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 7.970e-9
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSI 37
            EH +G+KV+VFKKKRRKGYRKK G RQ+LT + ID I
Sbjct:   65 EHLKGEKVIVFKKKRRKGYRKKNGHRQYLTKIRIDDI 101          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A6B2LZU9_9BACT (50S ribosomal protein L21 n=1 Tax=Oceanipulchritudo coccoides TaxID=2706888 RepID=A0A6B2LZU9_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 8.150e-9
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSITS 39
            E+ RG+KVLVFKKKRRKGYR K+G RQ L+V+ I+SIT+
Sbjct:   66 ENKRGKKVLVFKKKRRKGYRNKRGHRQELSVIKIESITA 104          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A1M4URI7_9FLAO (50S ribosomal protein L21 n=3 Tax=Psychroflexus TaxID=83612 RepID=A0A1M4URI7_9FLAO)

HSP 1 Score: 57.8 bits (138), Expect = 8.160e-9
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSITSAFDQHEWPLPKEFPSKE 56
            +H +G KV+VFKKKRRKGY+KK G RQ+LT + I+ +T++  +      KE PSKE
Sbjct:   76 KHLKGDKVIVFKKKRRKGYKKKNGHRQYLTEILIEGLTASGAKKSSASKKEEPSKE 131          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: I0K2H1_9BACT (50S ribosomal protein L21 n=5 Tax=Cytophagales TaxID=768507 RepID=I0K2H1_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 8.340e-9
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSIT 38
            EH +G+KV+VFKKKRRKGY+KK G RQ+LT L I+ IT
Sbjct:   67 EHLKGEKVIVFKKKRRKGYKKKNGHRQYLTKLQINDIT 104          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: UPI001BB80515 (50S ribosomal protein L21 n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB80515)

HSP 1 Score: 56.6 bits (135), Expect = 1.020e-8
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSITS 39
            EH +G KV+VFKKKRRKGYRKK G RQ+LT L I  IT+
Sbjct:   65 EHLKGDKVIVFKKKRRKGYRKKNGHRQYLTSLEISGITA 103          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A5C6RNU3_9BACT (50S ribosomal protein L21 n=1 Tax=Phaeodactylibacter luteus TaxID=1564516 RepID=A0A5C6RNU3_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.100e-8
Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    2 HTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSI 37
            H +G KVLVF+KKRRKGYRKK G RQH T + IDSI
Sbjct:   65 HQKGDKVLVFRKKRRKGYRKKNGHRQHFTKIKIDSI 100          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A7Y3H307_9BACT (50S ribosomal protein L21 n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y3H307_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.130e-8
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSI 37
            EH +G KV+VFKKKRRKGYR K G RQH T + IDSI
Sbjct:   65 EHVKGDKVIVFKKKRRKGYRVKNGHRQHFTKIKIDSI 101          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: A0A2D0MX55_9BACT (50S ribosomal protein L21 n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0MX55_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.130e-8
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSI 37
            EH +G KV+VFKKKRRKGYR K G RQH T + IDSI
Sbjct:   65 EHVKGDKVIVFKKKRRKGYRVKNGHRQHFTKIKIDSI 101          
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Match: C6W6M4_DYAFD (50S ribosomal protein L21 n=29 Tax=Dyadobacter TaxID=120831 RepID=C6W6M4_DYAFD)

HSP 1 Score: 55.8 bits (133), Expect = 1.130e-8
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSITS 39
            EH +G+KV+VFKKKRRKGYR K G RQ+LT +SID I +
Sbjct:   65 EHLKGEKVIVFKKKRRKGYRVKNGHRQYLTKISIDEIVA 103          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75415.17796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2T4WZE3_9BACT7.970e-972.2250S ribosomal protein L21 n=2 Tax=Bacteroidetes Ta... [more]
A0A7C9B9F8_9BACT7.970e-970.2750S ribosomal protein L21 n=1 Tax=Cytophagaceae ba... [more]
A0A6B2LZU9_9BACT8.150e-969.2350S ribosomal protein L21 n=1 Tax=Oceanipulchritud... [more]
A0A1M4URI7_9FLAO8.160e-951.7950S ribosomal protein L21 n=3 Tax=Psychroflexus Ta... [more]
I0K2H1_9BACT8.340e-968.4250S ribosomal protein L21 n=5 Tax=Cytophagales Tax... [more]
UPI001BB805151.020e-869.2350S ribosomal protein L21 n=1 Tax=Cryomorphaceae b... [more]
A0A5C6RNU3_9BACT1.100e-872.2250S ribosomal protein L21 n=1 Tax=Phaeodactylibact... [more]
A0A7Y3H307_9BACT1.130e-870.2750S ribosomal protein L21 n=1 Tax=Saprospiraceae b... [more]
A0A2D0MX55_9BACT1.130e-870.2750S ribosomal protein L21 n=1 Tax=Flavilitoribacte... [more]
C6W6M4_DYAFD1.130e-866.6750S ribosomal protein L21 n=29 Tax=Dyadobacter Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 1..37
e-value: 2.5E-12
score: 46.9
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 1..40
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 8..30
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75415contigM-pyrifera_M_contig75415:2..172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75415.17796.1mRNA_M-pyrifera_M_contig75415.17796.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75415 2..172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75415.17796.1 ID=prot_M-pyrifera_M_contig75415.17796.1|Name=mRNA_M-pyrifera_M_contig75415.17796.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
EHTRGQKVLVFKKKRRKGYRKKQGFRQHLTVLSIDSITSAFDQHEWPLPK
EFPSKED
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028909L21p-like
IPR018258Ribosomal_L21_CS
IPR036164L21-like_sf