prot_M-pyrifera_M_contig75379.17792.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75379.17792.1
Unique Nameprot_M-pyrifera_M_contig75379.17792.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length165
Homology
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S2JF22_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JF22_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 1.410e-18
Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    1 MARTLGSASPNQVTVSGRRVLIGWLSGATAVQSLPRDLTISKHGELLQAFVPELGVLRA----SPTPLPPSGSP------ANASLAAEIIADFALNLDQGFPQTPFGINLQVGDGGATGLLLD 113
            MARTLGS  PNQV VSGRRVL+GW+ G  A QSL RDL++S   ELLQAFVPEL  LR     + T + PS +        + SL  E++  F+       P +PFG+++    GG+T + +D
Sbjct:    1 MARTLGS-DPNQVAVSGRRVLLGWIGGTPASQSLARDLSLSNQHELLQAFVPELKTLRQPSSFAVTRVAPSANDERSVVHCSGSLQLELVGHFSW-AGHDHPISPFGVSVL---GGSTSITID 118          
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A0M0JVQ2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVQ2_9EUKA)

HSP 1 Score: 81.6 bits (200), Expect = 5.300e-15
Identity = 66/192 (34.38%), Postives = 90/192 (46.88%), Query Frame = 0
Query:    1 MARTLGSASPNQVTVSGRRVLIGW----------LSGATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLPPSGSPANASLAAEIIADFALNL-DQGFPQTPFGINLQVGDGGATGLLLDLPNEHILIGD---------RAAPYIEDPDNPT-------HIHVHVFVDHGIIEVIVNNRTAATIYDQP 165
            MARTLGS   +QVTV GRRVLIGW          L+   + QS+ RDL ++    LLQ FVPEL   R +        +PA+A + AE+ A    +  D   P    GI++  GDG     +  LP+  ++  +         RA P        T          +H  +DH I+E+IVNN TA  +Y  P
Sbjct:  350 MARTLGSEQVDQVTVPGRRVLIGWTGPAPSDMPFLANLGSAQSISRDLALAPDRSLLQRFVPELTTARLTAV------APADAGMRAEVYATLPASCADAAGPTDACGISV-FGDGVNATTIKLLPSVGLVAVNATLQGNTLVRAGPLPPQCTAATCGEGAEDGWRIHAILDHSILELIVNNATAFVVYVAP 534          
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S2TW26_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW26_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 4.570e-11
Identity = 66/194 (34.02%), Postives = 89/194 (45.88%), Query Frame = 0
Query:    1 MARTLGSASPNQVTVSGRRVLIGWLS-GATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLP---------PSGSPANASLA----AEIIADFALNLD-QGFPQTPFGINLQVGDGGA--TGLLLDLPNEHILIGDRAAPYIEDPDNPT------------HIHVHVFVDHGIIEVIVNNRTAATIYDQP 165
            MAR LGS   N V  SGR+V+  WL     A+ SL RDL++     LLQAFVPEL  LR   +             SG   N ++     AEI  +F   ++ Q      FGIN+   D     T L +DL +   +I        +    P              I +HV+VD G+IE+IVNNRTA ++  +P
Sbjct:   44 MARALGSEQQNHVLGSGRKVMFAWLKENPNAILSLGRDLSLDDDLTLLQAFVPELQALRVQGSHALLSSDRQQQFSSGEDNNMAVRVGMHAEIYGEFTNLVEAQAKGLRGFGINVLACDEQREFTRLGIDLDHGLAIINGIRQKRRKPVGGPLVFGGRGELRKMDRIAMHVYVDGGMIEMIVNNRTAVSLPVKP 237          
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: UPI000A083307 (GH92 family glycosyl hydrolase n=1 Tax=Paenibacillus barengoltzii TaxID=343517 RepID=UPI000A083307)

HSP 1 Score: 55.5 bits (132), Expect = 7.080e-6
Identity = 61/189 (32.28%), Postives = 85/189 (44.97%), Query Frame = 0
Query:    8 ASPNQVTVSGRRVLIGWL-----------SGATAVQSLPRDLTISKHGE---LLQAFVPELGVLRASPTPLPPS-GSPANASL-----AAEIIADFALNLDQGFPQTPFGINLQVGDGGA--TGLLLDLPNEHILIGDRA--------------APYIEDPDNPTHIHVHVFVDHGIIEVIVNNRTAAT 160
            A  + +   GRR+L GWL            G + VQS+PR  T+  H +   L+   V EL VLR +P  LP +  SP +  L     AAEIIA+F L   +    T FG  +     G   T L  D+    I++ DR+              APY  +      + VH+F+DH I+EV VN+    T
Sbjct: 1015 APQSMLAPDGRRILWGWLPDNARGEMKEIQGWSGVQSIPR--TVELHPDTNTLIFKPVVELQVLRETPYELPKTVWSPGHHELGIQGKAAEIIAEFELIGSE----TSFGFEVFRSPDGEEQTTLKFDVSGGQIVL-DRSRSSQAAGVHSWELVAPY--EMQQHKQLRVHLFLDHSIVEVFVNDELCLT 1194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2JF22_9EUKA1.410e-1845.53Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A0M0JVQ2_9EUKA5.300e-1534.38Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2TW26_9EUKA4.570e-1134.02Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
UPI000A0833077.080e-632.28GH92 family glycosyl hydrolase n=1 Tax=Paenibacill... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.560coord: 71..162
e-value: 2.3E-5
score: 25.9
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain superfamilyGENE3D2.115.10.20coord: 5..61
e-value: 2.7E-5
score: 25.4
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 72..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75379contigM-pyrifera_M_contig75379:196..690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75379.17792.1mRNA_M-pyrifera_M_contig75379.17792.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75379 166..690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75379.17792.1 ID=prot_M-pyrifera_M_contig75379.17792.1|Name=mRNA_M-pyrifera_M_contig75379.17792.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp
MARTLGSASPNQVTVSGRRVLIGWLSGATAVQSLPRDLTISKHGELLQAF
VPELGVLRASPTPLPPSGSPANASLAAEIIADFALNLDQGFPQTPFGINL
QVGDGGATGLLLDLPNEHILIGDRAAPYIEDPDNPTHIHVHVFVDHGIIE
VIVNNRTAATIYDQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023296Glyco_hydro_beta-prop_sf
IPR013320ConA-like_dom_sf