prot_M-pyrifera_M_contig7520.17758.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7520.17758.1
Unique Nameprot_M-pyrifera_M_contig7520.17758.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length354
Homology
BLAST of mRNA_M-pyrifera_M_contig7520.17758.1 vs. uniprot
Match: D7FV26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV26_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 8.340e-68
Identity = 161/373 (43.16%), Postives = 209/373 (56.03%), Query Frame = 0
Query:    1 APPRDFELVGCLKNHPGCEPRRGRVARGVGVPGVFNELVFCF-----TGAGSCEVEKDR--LARLVKLGEGALKKNAKLKPEGGRGGWVDEPFGGASGRSDYDNDPSEFDAPAVTG---------KTVVLVVLWDCPDGT-ISQELARTATKESVEVAATAAVDQAWIVRSIEEGSPVPFDDFRLSQGGLHSPSSTAGARKSSEERAKRPGKGRLSIRPASSRQEVVLDVGNERHNRNAPLST--CDRQKEAEKLMLDAQAAIEAADRVTKQAEALRPPPL-GAKGFEFTRLGGRKKVKKGIPDASRDLTCFCWDRFAQADLKDTLDKAGYLSLSGKGPDDSDHKLGEFWFDKVYDGFFLKRSESAIPEAERR 353
            +PPRDFELVGC +NH GC+PRRGR+ RG  VPGVF+   FC       GA S  V+  R  L RL++LG G +   A + P    G + D PFG +   S  D++    +A +  G         +TVV++ + D  DG  +S  LA+ AT +  E+ A AAVD+ W +RS++ GS VPFD   LS   +  PS   G   SS+  A R    R     A  R EV+LD+ ++   R+A       DR+K A  L +    A E +   TKQ  A  PPP  GA GFEFTR G +KK K G P+    +T F  +  AQ DLK+ L K GYL      PD  +H+LGEFWFD VYDGFF+KRSE+AIPEA+RR
Sbjct:    3 SPPRDFELVGCSENHEGCKPRRGRLNRGFKVPGVFHGYAFCVIAGKGAGASSSRVDGSRSGLERLLRLGGGVIL--APVPPRAAEG-FCDNPFG-SEDISGSDDEAVHVEAGSGDGGDNEATAKERTVVVLAMPDSSDGRGVSLSLAKAATDKCRELGAAAAVDRGWALRSLDIGSRVPFDGHDLSDDDIRRPSGQRGGG-SSKRAASRLSIPRPRCGDARPRTEVLLDLEDDGGRRSAMAEAVRADREKTARLLRI----AEEVSKAPTKQVPASDPPPAPGADGFEFTRNGSKKKAK-GPPN----VTTFAAENKAQRDLKEALHKVGYLDADSSDPD-KEHRLGEFWFDLVYDGFFMKRSENAIPEAKRR 360          
BLAST of mRNA_M-pyrifera_M_contig7520.17758.1 vs. uniprot
Match: A0A6H5KNX9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX9_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 3.380e-63
Identity = 162/378 (42.86%), Postives = 211/378 (55.82%), Query Frame = 0
Query:    1 APPRDFELVGCLKNHPGCEPRRGRVARGVGVPGVFNELVFCF-----TGAGSCEVEKDR--LARLVKLGEGALKKNAKLKPEGGRGGWVDEPFGGASGRSDYDNDPSEFDAPAVTG---------KTVVLVVLWDCPDGT-ISQELARTATKESVEVAATAAVDQAWIVRSIEEGSPVPFDDFRLSQGGLHSPSSTAGARKSSEERAKRPGKGRLSIR-----PASSRQEVVLDVGNERHNRNAPLSTC--DRQKEAEKLMLDAQAAIEAADRVTKQAEALRPPP-LGAKGFEFTRLGGRKKVKKGIPDASRDLTCFCWDRFAQADLKDTLDKAGYLSLSGKGPDDSDHKLGEFWFDKVYDGFFLKRSESAIPEAERR 353
            +PPRDFELVGC +NH GC+PRRGR+ RG  VPGVF+   FC       GA    V+  R  L RL++LG G +   A + P    G + D PFG +    D D++    +A +  G         + VV++ L D  DG  +S  LA+ AT +  E+ A AAVD+ W +RS++ GS +PFD   LS   +  PS   G   S      +P   RLSI       A  R EV+LD+ ++   R+A       DR+K A  L +    A E +   TKQ  A  PPP LGA GFEFTR G +KK K G P+    +T F  +  AQ DLK+ L KAGYL  +   PD  +H+LGEFWFD VYDGFF+KRSE+AIPEA+RR
Sbjct: 1874 SPPRDFELVGCSENHEGCKPRRGRLNRGFKVPGVFHGYAFCVIAGGGAGASFSTVDGSRSGLERLLRLGGGVIL--ASVAPRAAEG-FCDNPFG-SEDMPDSDDEVVHVEAGSGDGGDNAAAAKERMVVVLALPDSSDGHGVSLSLAKIATDKCRELGAAAAVDRGWALRSLDRGSRLPFDGHDLSDDDVRRPSGQRGGGSS------KPAASRLSIPRRRCGDAPPRTEVLLDLEDDGGRRSAMAEAVRTDREKTARLLRI----AEEVSKAPTKQVPASDPPPGLGADGFEFTRNGSKKKAK-GPPN----VTTFAAENKAQRDLKEALHKAGYLDANSSDPD-KEHRLGEFWFDLVYDGFFMKRSENAIPEAKRR 2231          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7520.17758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV26_ECTSI8.340e-6843.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNX9_9PHAE3.380e-6342.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 30..168
score: 8.249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7520contigM-pyrifera_M_contig7520:10821..12735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7520.17758.1mRNA_M-pyrifera_M_contig7520.17758.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7520 10821..12735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7520.17758.1 ID=prot_M-pyrifera_M_contig7520.17758.1|Name=mRNA_M-pyrifera_M_contig7520.17758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=354bp
APPRDFELVGCLKNHPGCEPRRGRVARGVGVPGVFNELVFCFTGAGSCEV
EKDRLARLVKLGEGALKKNAKLKPEGGRGGWVDEPFGGASGRSDYDNDPS
EFDAPAVTGKTVVLVVLWDCPDGTISQELARTATKESVEVAATAAVDQAW
IVRSIEEGSPVPFDDFRLSQGGLHSPSSTAGARKSSEERAKRPGKGRLSI
RPASSRQEVVLDVGNERHNRNAPLSTCDRQKEAEKLMLDAQAAIEAADRV
TKQAEALRPPPLGAKGFEFTRLGGRKKVKKGIPDASRDLTCFCWDRFAQA
DLKDTLDKAGYLSLSGKGPDDSDHKLGEFWFDKVYDGFFLKRSESAIPEA
ERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom